Miyakogusa Predicted Gene
- Lj0g3v0159919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0159919.1 Non Chatacterized Hit- tr|B8BBH4|B8BBH4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,36.84,0.0000000007,N7-RELATED PROTEIN,NULL; F-BOX/LEUCINE RICH
REPEAT PROTEIN,NULL; RNI-like,NULL; FBOX,F-box domain, c,CUFF.9918.1
(861 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 ... 1661 0.0
gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-lik... 100 3e-20
gnl|LJGI|TC82289 weakly similar to UniRef100_Q2HSK3 Cluster: Cyc... 52 6e-06
>gnl|LJGI|TC80874 weakly similar to UniRef100_O82023 Cluster: N7 protein; n=1;
Medicago truncatula|Rep: N7 protein - Medicago
truncatula (Barrel medic), partial (34%)
Length = 1017
Score = 1661 bits (838), Expect = 0.0
Identities = 841/842 (99%)
Strand = Plus / Plus
Query: 1 atggcattttctgaagaaaggcctgtgaaggaagccaaaggagagagcgcagaggaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atggcattttctgaagaaaggcctgtgaaggaagccaaaggagagagcgcagaggaggaa 155
Query: 61 ccaaactggcttgaattaattcctgttgaactcgctgctaggattctaaacaagcttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 ccaaactggcttgaattaattcctgttgaactcgctgctaggattctaaacaagcttggt 215
Query: 121 atctttgaaattttcaccaatgcaagcctagtgtgtcccttctggttgaaagtttgcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 atctttgaaattttcaccaatgcaagcctagtgtgtcccttctggttgaaagtttgcaag 275
Query: 181 aatcccctcacttggcgcaccattgacttgaccaatcactctcaccatgcagggtccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatcccctcacttggcgcaccattgacttgaccaatcactctcaccatgcagggtccaaa 335
Query: 241 ttgctcaagttttgtctccatgccattgaacgaagctgtggttctttggaagacattagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ttgctcaagttttgtctccatgccattgaacgaagctgtggttctttggaagacattagt 395
Query: 301 attgaggatttttgcactgatgaaatcctccaatccattgctgatagcggaagtcaccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 attgaggatttttgcactgatgaaatcctccaatccattgctgatagcggaagtcaccta 455
Query: 361 cgacgaatgcggcttttgaactgctgggagatttctgatgaacaattgagtgagactgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cgacgaatgcggcttttgaactgctgggagatttctgatgaacaattgagtgagactgtg 515
Query: 421 aagaagcttccactgttggaggagtttgaaatttcattcagccccctatctaaggacact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aagaagcttccactgttggaggagtttgaaatttcattcagccccctatctaaggacact 575
Query: 481 ttggaactcatgggcaaatgttgcccacatttgaaagtgctgaaatttaacatgagggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 ttggaactcatgggcaaatgttgcccacatttgaaagtgctgaaatttaacatgagggga 635
Query: 541 ctgaaaggctttgaatgtgatgatgaggcatttgctattgcaaaaaccatgcctcagctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ctgaaaggctttgaatgtgatgatgaggcatttgctattgcaaaaaccatgcctcagctg 695
Query: 601 tgtcatcttcagcttttgggaaacaggctcactaataatggcttgattgctattcttgat 660
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 696 tgtcatcttcagcttttgggaaacaggctcactaataacggcttgattgctattcttgat 755
Query: 661 gggtgccctcatcttgaatctcttgacctgcgtgcttgttctaatgttgttctgagtgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gggtgccctcatcttgaatctcttgacctgcgtgcttgttctaatgttgttctgagtgga 815
Query: 721 agattgaaggaaaggtgtcttaagcagatcaaagatttacgtcttccaggggatgtgagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 agattgaaggaaaggtgtcttaagcagatcaaagatttacgtcttccaggggatgtgagt 875
Query: 781 gaagttcccaagtatgttgatgttgaaggttgtggctgtggatgtgaggatgatcacaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gaagttcccaagtatgttgatgttgaaggttgtggctgtggatgtgaggatgatcacaag 935
Query: 841 gg 842
||
Sbjct: 936 gg 937
>gnl|LJGI|TC63939 similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (37%)
Length = 840
Score = 99.6 bits (50), Expect = 3e-20
Identities = 161/198 (81%)
Strand = Plus / Plus
Query: 571 tttgctattgcaaaaaccatgcctcagctgtgtcatcttcagcttttgggaaacaggctc 630
|||| ||| ||| |||| |||||| ||||| |||| || ||| || |||||||||| |||
Sbjct: 327 tttgttatagcagaaacaatgcctgagctgcgtcacctacagattatgggaaacagtctc 386
Query: 631 actaataatggcttgattgctattcttgatgggtgccctcatcttgaatctcttgacctg 690
| |||| |||||||| |||||||||||||||| ||||||| ||| |||| |||||||||
Sbjct: 387 agtaatgatggcttgcttgctattcttgatggttgccctcttctcgaatatcttgaccta 446
Query: 691 cgtgcttgttctaatgttgttctgagtggaagattgaaggaaaggtgtcttaagcagatc 750
| | |||| || ||||| | ||||||| || ||| | | ||||||| | ||||||||
Sbjct: 447 caaggttgtccttttgttgatttgagtggtagtttggaaaagaggtgtcatgagcagatc 506
Query: 751 aaagatttacgtcttcca 768
||| ||||||| ||||||
Sbjct: 507 aaatatttacggcttcca 524
>gnl|LJGI|TC82289 weakly similar to UniRef100_Q2HSK3 Cluster: Cyclin-like F-box; n=1;
Medicago truncatula|Rep: Cyclin-like F-box - Medicago
truncatula (Barrel medic), partial (50%)
Length = 1365
Score = 52.0 bits (26), Expect = 6e-06
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 251 tttgtctccatgccattgaacgaagctgtggttctttggaagacattagtattg 304
|||||| | |||||||||| |||||||| ||| | ||||||||||||||||||
Sbjct: 1002 tttgtcgctatgccattgatcgaagctgcggtcatctggaagacattagtattg 1055