Miyakogusa Predicted Gene
- Lj0g3v0159789.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0159789.1 tr|G7IA59|G7IA59_MEDTR DEAD-box ATP-dependent RNA
helicase OS=Medicago truncatula GN=MTR_1g061970 PE,77.34,0,seg,NULL;
DEAD,DNA/RNA helicase, DEAD/DEAH box type, N-terminal;
Helicase_C,Helicase, C-terminal; P-,CUFF.9911.1
(1437 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO032305 similar to UniRef100_A7QJ99 Cluster: Chromosom... 769 0.0
gnl|LJGI|TC71581 similar to UniRef100_Q93ZG7 Cluster: DEAD-box A... 440 e-122
>gnl|LJGI|GO032305 similar to UniRef100_A7QJ99 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 683
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1050 catacaaggtgctcttaataatgaagatagagacaagattgtcaaggagttcagagatgg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 catacaaggtgctcttaataatgaagatagagacaagattgtcaaggagttcagagatgg 61
Query: 1110 gttaactcaggttctgatatcaaccgatgttcttgcccgcggctttgatcaacaacagat 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gttaactcaggttctgatatcaaccgatgttcttgcccgcggctttgatcaacaacagat 121
Query: 1170 taatttggttatcaactatgatcttccggtgaaacacactgctgagtatacccgtgaacc 1229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taatttggttatcaactatgatcttccggtgaaacacactgctgagtatacccgtgaacc 181
Query: 1230 cgagcctgattatgaggtgtatttgcacagggttggtagggctgggcgttttgggcgtaa 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cgagcctgattatgaggtgtatttgcacagggttggtagggctgggcgttttgggcgtaa 241
Query: 1290 gggggctgtatttaacctgatatctgatgaaagggatgcgaacatcatgtcaaagattga 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gggggctgtatttaacctgatatctgatgaaagggatgcgaacatcatgtcaaagattga 301
Query: 1350 aaaccatttcggcacccatgtaactgaggtgcgagaaaagagcactgaagactttaaagc 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaccatttcggcacccatgtaactgaggtgcgagaaaagagcactgaagactttaaagc 361
Query: 1410 atgtctcaaggaagctggtttgatatga 1437
||||||||||||||||||||||||||||
Sbjct: 362 atgtctcaaggaagctggtttgatatga 389
>gnl|LJGI|TC71581 similar to UniRef100_Q93ZG7 Cluster: DEAD-box ATP-dependent RNA
helicase 38; n=1; Arabidopsis thaliana|Rep: DEAD-box
ATP-dependent RNA helicase 38 - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 805
Score = 440 bits (222), Expect = e-122
Identities = 228/230 (99%)
Strand = Plus / Plus
Query: 1208 ctgctgagtatacccgtgaacccgagcctgattatgaggtgtatttgcacagggttggta 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctgctgagtatacccgtgaacccgagcctgattatgaggtgtatttgcacagggttggta 61
Query: 1268 gggctgggcgttttgggcgtaagggggctgtatttaacctgatatctgatgaaagggatg 1327
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 62 gggctgggcgttttgggcgtaagggggctgtatttaacctgatatctgattaaagggatg 121
Query: 1328 cgaacatcatgtcaaagattgaaaaccatttcggcacccatgtaactgaggtgcgagaaa 1387
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgaacatcatgtcaaagattgaaaaccatttcggcacccatgtaactgaggtgcgagaaa 181
Query: 1388 agagcactgaagactttaaagcatgtctcaaggaagctggtttgatatga 1437
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agagcactgaagactttaaagcatgtctcaaggaagctggtttgatatga 231