Miyakogusa Predicted Gene
- Lj0g3v0159769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0159769.1 CUFF.9907.1
(624 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036470 similar to UniRef100_A7QJB9 Cluster: Chromosom... 737 0.0
gnl|LJGI|AV424768 similar to UniRef100_A7QJB9 Cluster: Chromosom... 511 e-144
gnl|LJGI|TC78351 similar to UniRef100_A7QJB9 Cluster: Chromosome... 248 4e-65
>gnl|LJGI|GO036470 similar to UniRef100_A7QJB9 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 624
Score = 737 bits (372), Expect = 0.0
Identities = 381/384 (99%)
Strand = Plus / Plus
Query: 241 gacaaggtgttggacattagtggagtgcagacttatgtgatcaacagtgctagagttctg 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gacaaggtgttggacatcagtggagtgcagacttatgtgatcaacagtgctagagttctg 61
Query: 301 tttctcaatgagaggcctcaaccaaagtctgggaaaggagtatctcacatctgtgagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tttctcaatgagaggcctcaaccaaagtctgggaaaggagtatctcacatctgtgagatt 121
Query: 361 tgtggtagaaccctcttggatccatttcttttctgttctttgggatgcaagcttgtggga 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122 tgtggtagaaccctcttggatccatttcgtttctgttctttgggatgcaagcttgtggga 181
Query: 421 ataaaaagaaatggggatgcaagctttaacaaggaggcattggcaatggatgggatgtca 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 182 ataaaaagaaatggggatgcaagctttaacgaggaggcattggcaatggatgggatgtca 241
Query: 481 aggagatcagtctcttcaagacagcatgaagaagaattgcgtgaaggatcacaagaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aggagatcagtctcttcaagacagcatgaagaagaattgcgtgaaggatcacaagaagac 301
Query: 541 atgtaccctgacacgcctcctccacctgcttcaaatgcaaggagaaggaaagggattcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atgtaccctgacacgcctcctccacctgcttcaaatgcaaggagaaggaaagggattcct 361
Query: 601 catagagctccttttggctcataa 624
||||||||||||||||||||||||
Sbjct: 362 catagagctccttttggctcataa 385
>gnl|LJGI|AV424768 similar to UniRef100_A7QJB9 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 417
Score = 511 bits (258), Expect = e-144
Identities = 258/258 (100%)
Strand = Plus / Plus
Query: 1 atggattcagagcaggacacaatgttggtgcctccatggctcaaaccattgcttaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 atggattcagagcaggacacaatgttggtgcctccatggctcaaaccattgcttaaaaca 219
Query: 61 cctttcttcaatgtctgtcgcattcatggagacgcggcgaggagcgaatgcaacatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cctttcttcaatgtctgtcgcattcatggagacgcggcgaggagcgaatgcaacatgttt 279
Query: 121 tgcttggactgcaatggtgatgccttttgcttttactgccgttcctcaaggcacaaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgcttggactgcaatggtgatgccttttgcttttactgccgttcctcaaggcacaaggat 339
Query: 181 caccatgtcattcagataaggagatcttcttatcacaatgtggtgagggtgggggaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caccatgtcattcagataaggagatcttcttatcacaatgtggtgagggtgggggaaatt 399
Query: 241 gacaaggtgttggacatt 258
||||||||||||||||||
Sbjct: 400 gacaaggtgttggacatt 417
>gnl|LJGI|TC78351 similar to UniRef100_A7QJB9 Cluster: Chromosome chr8 scaffold_106,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_106, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1137
Score = 248 bits (125), Expect = 4e-65
Identities = 292/348 (83%), Gaps = 6/348 (1%)
Strand = Plus / Plus
Query: 106 gaatgcaacatgttttgcttggactgcaatggtgat------gccttttgcttttactgc 159
|||||||||||||||||| | || |||||||||| | ||||||||||| || |||
Sbjct: 226 gaatgcaacatgttttgcctcgattgcaatggtgcttgtggtgccttttgcttctattgc 285
Query: 160 cgttcctcaaggcacaaggatcaccatgtcattcagataaggagatcttcttatcacaat 219
||||| |||| |||||| ||||| || |||||||||||||| |||||||| ||||| ||
Sbjct: 286 cgttcttcaaagcacaaagatcatcaagtcattcagataagaagatcttcatatcatgat 345
Query: 220 gtggtgagggtgggggaaattgacaaggtgttggacattagtggagtgcagacttatgtg 279
||||||||||| || ||| | || |||||||| || | |||||| ||||||||||||
Sbjct: 346 gtggtgagggtaacagagattcagaatgtgttggatataactggagttcagacttatgtg 405
Query: 280 atcaacagtgctagagttctgtttctcaatgagaggcctcaaccaaagtctgggaaagga 339
|||||||||||||||||| |||| || |||||||||||||||||||| ||||| |||||
Sbjct: 406 atcaacagtgctagagttttgttcctgaatgagaggcctcaaccaaaatctggaaaaggg 465
Query: 340 gtatctcacatctgtgagatttgtggtagaaccctcttggatccatttcttttctgttct 399
|| ||||||| |||||||||||||| |||| ||||||||| || |||| |||||||||
Sbjct: 466 atagctcacatttgtgagatttgtggaagaagcctcttggacccgtttcggttctgttct 525
Query: 400 ttgggatgcaagcttgtgggaataaaaagaaatggggatgcaagcttt 447
|| || || ||||||| ||||| || | |||||||||||||||||||
Sbjct: 526 ttagggtgtaagcttgaaggaatcaagaaaaatggggatgcaagcttt 573
Score = 89.7 bits (45), Expect = 2e-17
Identities = 93/109 (85%)
Strand = Plus / Plus
Query: 509 aagaagaattgcgtgaaggatcacaagaagacatgtaccctgacacgcctcctccacctg 568
||||||||||||||||||| ||| |||||||||| || | ||||||| ||||||||
Sbjct: 644 aagaagaattgcgtgaaggctcaactcaagacatgtatccggccacgccttctccacctc 703
Query: 569 cttcaaatgcaaggagaaggaaagggattcctcatagagctccttttgg 617
|||||| |||||| ||||| ||||| ||||| ||||| |||||||||||
Sbjct: 704 cttcaagtgcaagaagaagaaaaggcattccccatagggctccttttgg 752