Miyakogusa Predicted Gene
- Lj0g3v0159229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0159229.1 tr|B9H159|B9H159_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_855855 PE=4
SV=1,67.45,0,AMIDASE,NULL; AMIDASE,Amidase; seg,NULL; no
description,Amidase signature domain; Amidase,Amidase,CUFF.9861.1
(1023 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS338525 similar to UniRef100_A7P878 Cluster: Chromosom... 1066 0.0
gnl|LJGI|FS341083 similar to UniRef100_A7P883 Cluster: Chromosom... 58 1e-07
>gnl|LJGI|FS338525 similar to UniRef100_A7P878 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 754
Score = 1066 bits (538), Expect = 0.0
Identities = 538/538 (100%)
Strand = Plus / Plus
Query: 1 atggaaacaacaacacacaaggtttcttctgtttgctgtatagtactcttaatttcagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 atggaaacaacaacacacaaggtttcttctgtttgctgtatagtactcttaatttcagtg 276
Query: 61 acgttcttcaccagtttgataaatgcaatcgacaatgaatgtgaagaagaactgttcaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 acgttcttcaccagtttgataaatgcaatcgacaatgaatgtgaagaagaactgttcaac 336
Query: 121 atccacgaagccaccatagaggaaatccaagacgccttcacacgccaccacctcacgtcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atccacgaagccaccatagaggaaatccaagacgccttcacacgccaccacctcacgtcc 396
Query: 181 agggaactcgtcgacttctacctgcaccggatcgaggctctcaatcccatcctccgcgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agggaactcgtcgacttctacctgcaccggatcgaggctctcaatcccatcctccgcgcc 456
Query: 241 gttctggaagtcaacccggacgcgcgtgatcaagcggacaaggctgatcgcgagagacgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gttctggaagtcaacccggacgcgcgtgatcaagcggacaaggctgatcgcgagagacgg 516
Query: 301 cggcggagtcgggaccgttcattgctgcacggggttccggtgctgctgaaggacagcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cggcggagtcgggaccgttcattgctgcacggggttccggtgctgctgaaggacagcatc 576
Query: 361 gccaccgtggatgagatgaacacgacggcggggtcgtttgcgttgctggggtcgaaggtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gccaccgtggatgagatgaacacgacggcggggtcgtttgcgttgctggggtcgaaggtt 636
Query: 421 gcgcgtgatgcgcacgtggtggcgaggctgagagacgccggtgcggtgattctggggaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gcgcgtgatgcgcacgtggtggcgaggctgagagacgccggtgcggtgattctggggaaa 696
Query: 481 gcgagcctgtcggagtggtatacacttcgttcttccaccatgcctgaagcttggtgcg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gcgagcctgtcggagtggtatacacttcgttcttccaccatgcctgaagcttggtgcg 754
>gnl|LJGI|FS341083 similar to UniRef100_A7P883 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 759
Score = 58.0 bits (29), Expect = 1e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 649 actgaaactgatggctccattatttgcccagctgatcacaactcagtagtggggttcaag 708
||||| ||||||||||||||| | ||||| | ||| ||||||||||||||| ||||
Sbjct: 625 actgagactgatggctccattttatgcccttcagatgctaactcagtagtggggatcaaa 684
Query: 709 cccaccgttggactcactagcagagcagg 737
|| || ||||| |||||||| ||||||||
Sbjct: 685 ccaacagttggtctcactagtagagcagg 713