Miyakogusa Predicted Gene

Lj0g3v0159039.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0159039.1 tr|G7J2I8|G7J2I8_MEDTR Chloroplast small heat
shock protein OS=Medicago truncatula GN=MTR_3g086050 P,67.36,0,HEAT
SHOCK PROTEIN 26,NULL; SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY,NULL;
seg,NULL; HSP20,Alpha crys,CUFF.9836.1
         (801 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV415998                                                     505   e-142

>gnl|LJGI|AV415998 
          Length = 280

 Score =  505 bits (255), Expect = e-142
 Identities = 272/280 (97%)
 Strand = Plus / Plus

                                                                       
Query: 57  ttttggcatcaaattctcaacaaaattaatggcacaggcttcatcctccattttgggtct 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttttggcatcaaattctcaacaaaattaatggcacaggcttcatcctccattttgggtct 60

                                                                       
Query: 117 taacctccccatacttcctaagacatcatcaagggatgttcatgtttatccctctggaaa 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taacctccccatacttcctaagacatcatcaagggatgttcatgtttatccctctggaaa 120

                                                                       
Query: 177 aaccctttttcctccattgtccaagttgaagcccctcagagccatgacaggaggcgacgc 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaccctttttcctccattgtccaagttgaagcccctcagagccatgacaggaggcgacgc 180

                                                                       
Query: 237 aagagaacaaaagcttgaaagtgtgccaagatacaacaacaacaagcctcactcccaacc 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 aagagaacaaaagcttgaaagtgtgccaagatacaacaacaacaagcctcactgccaacc 240

                                                   
Query: 297 cnnnnnnngagttgtcccttctgcacccataggtctatgg 336
           |       ||||||||||||||||||||||||||||||||
Sbjct: 241 caaaaaaagagttgtcccttctgcacccataggtctatgg 280