Miyakogusa Predicted Gene
- Lj0g3v0158819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0158819.1 Non Chatacterized Hit- tr|I3SF92|I3SF92_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,44.64,0.062,seg,NULL,21444_g.1
(325 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61586 644 0.0
gnl|LJGI|DC594090 homologue to UniRef100_A4M2J8 Cluster: Squalen... 448 e-125
gnl|LJGI|FS322393 homologue to UniRef100_A4M2J8 Cluster: Squalen... 256 7e-68
gnl|LJGI|CB826921 similar to UniRef100_UPI00006A06AA Cluster: Le... 240 4e-63
gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 pr... 192 9e-49
gnl|LJGI|AV777990 similar to UniRef100_Q4RFJ5 Cluster: Chromosom... 188 1e-47
gnl|LJGI|DC594505 100 1e-20
gnl|LJGI|DC594173 100 1e-20
gnl|LJGI|BW596036 100 1e-20
gnl|LJGI|GO016325 similar to UniRef100_A7PPK0 Cluster: Chromosom... 84 6e-16
gnl|LJGI|DC597023 weakly similar to UniRef100_Q41848 Cluster: Pr... 66 1e-10
gnl|LJGI|BP047225 homologue to UniRef100_Q8HKU2 Cluster: NADH-ub... 66 1e-10
gnl|LJGI|TC67944 62 2e-09
gnl|LJGI|AV771712 60 9e-09
gnl|LJGI|GO018859 weakly similar to UniRef100_A8KC04 Cluster: Gn... 52 2e-06
gnl|LJGI|FS331533 52 2e-06
gnl|LJGI|AU252148 similar to UniRef100_A5JPH2 Cluster: Transcrip... 52 2e-06
gnl|LJGI|TC74851 weakly similar to UniRef100_A7WM73 Cluster: Bet... 50 8e-06
gnl|LJGI|TC69945 weakly similar to UniRef100_A7WM73 Cluster: Bet... 50 8e-06
gnl|LJGI|TC65454 weakly similar to UniRef100_A7WM73 Cluster: Bet... 50 8e-06
gnl|LJGI|TC64249 50 8e-06
gnl|LJGI|TC59916 50 8e-06
>gnl|LJGI|TC61586
Length = 794
Score = 644 bits (325), Expect = 0.0
Identities = 325/325 (100%)
Strand = Plus / Plus
Query: 1 atgacaaaccctagctggcaatcacgtgtttcctctgccattctacccactccaccgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 atgacaaaccctagctggcaatcacgtgtttcctctgccattctacccactccaccgtac 82
Query: 61 cattcatcttcttctcttttcttgatttctcttccacagctcatagtttcccatctactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 cattcatcttcttctcttttcttgatttctcttccacagctcatagtttcccatctactg 142
Query: 121 tcgtcatctcgcgtctctacttccttcgattgcatcatcactgacgcttgccgttccgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 tcgtcatctcgcgtctctacttccttcgattgcatcatcactgacgcttgccgttccgtg 202
Query: 181 ctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagctcccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagctcccttc 262
Query: 241 atctactgttgtttgctcatccttctctctttttctagatctgaaagcatttccaaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atctactgttgtttgctcatccttctctctttttctagatctgaaagcatttccaaggag 322
Query: 301 caaatcgcgggtgagcaatccttgg 325
|||||||||||||||||||||||||
Sbjct: 323 caaatcgcgggtgagcaatccttgg 347
>gnl|LJGI|DC594090 homologue to UniRef100_A4M2J8 Cluster: Squalene-hopene cyclase;
n=1; Geobacter bemidjiensis Bem|Rep: Squalene-hopene
cyclase -, partial (2%)
Length = 503
Score = 448 bits (226), Expect = e-125
Identities = 236/238 (99%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 74 ctcttttcttgatttctcttccacag-ctcatagtttcccatctactgtcgtcatctcgc 132
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 ctcttttcttgatttctcttccacagactcatagtttcccatctactgtcgtcatctcgc 60
Query: 133 gtctctacttccttcgattgcatcatcactgacgcttgccgttccgtgctcaaggagatt 192
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 gtctctacttccttcgattgcatcatcgctgacgcttgccgttccgtgctcaaggagatt 120
Query: 193 tcgctcgccggaaatggaggaaccagccatatttcgacagctcccttcatctactgttgt 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgctcgccggaaatggaggaaccagccatatttcgacagctcccttcatctactgttgt 180
Query: 253 ttgctcatccttctctctttttctagatctgaaagcatttccaaggagcaaatcgcgg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgctcatccttctctctttttctagatctgaaagcatttccaaggagcaaatcgcgg 238
>gnl|LJGI|FS322393 homologue to UniRef100_A4M2J8 Cluster: Squalene-hopene cyclase;
n=1; Geobacter bemidjiensis Bem|Rep: Squalene-hopene
cyclase -, partial (2%)
Length = 741
Score = 256 bits (129), Expect = 7e-68
Identities = 207/229 (90%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 80 tcttgatttctcttccacagctcatagtttcccatctactgtcgtcatctcgcgtctcta 139
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tcttgatttctcttcaacagctcatagtttcccatctactgtcgtcatctcgcgtctctg 125
Query: 140 cttccttcgattgcatcatcactgacgcttgccgttccgtgctcaaggagatttcgctcg 199
|||||||| ||||||||||| | |||||| ||||||||||| ||||||||||||||||||
Sbjct: 126 cttccttcaattgcatcatcgccgacgctcgccgttccgtgttcaaggagatttcgctcg 185
Query: 200 ccggaaatggaggaaccagccatatttcgac-agctcccttcatctactgttgtttgctc 258
|| ||||||||||||||| ||| |||||||| ||||||||||||| |||||||||| ||
Sbjct: 186 ccagaaatggaggaaccaaccagatttcgacaagctcccttcatc-actgttgtttaatc 244
Query: 259 atccttctctctt-tttctagatctgaaagcatttccaaggagcaaatc 306
||||| || |||| ||| || |||||| ||||| ||||||||||||||
Sbjct: 245 atcctcctttcttaattccaggtctgaatgcattcccaaggagcaaatc 293
>gnl|LJGI|CB826921 similar to UniRef100_UPI00006A06AA Cluster: Leucine-rich repeats
and immunoglobulin-like domains protein 1 precursor
(LIG-1).; n=1;, partial (1%)
Length = 620
Score = 240 bits (121), Expect = 4e-63
Identities = 205/229 (89%), Gaps = 3/229 (1%)
Strand = Plus / Plus
Query: 80 tcttgatttctcttccacagctcatagtttcccatctactgtcgtcatctcgcgtctcta 139
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 tcttgatttctcttcaacagctcatagtttcccatctactgtcgtcatctcgcgtctctg 82
Query: 140 cttccttcgattgcatcatcactgacgcttgccgttccgtgctcaaggagatttcgctcg 199
|||||||| ||||||||||| | |||||| | ||||||||| ||||||||||||||||||
Sbjct: 83 cttccttcaattgcatcatcgccgacgctcggcgttccgtgttcaaggagatttcgctcg 142
Query: 200 ccggaaatggaggaaccagccatatttcgac-agctcccttcatctactgttgtttgctc 258
|| ||||||||||||||| ||| |||||||| | ||||||||||| |||||||||| ||
Sbjct: 143 ccagaaatggaggaaccaaccagatttcgacaatctcccttcatc-actgttgtttaatc 201
Query: 259 atccttctctctt-tttctagatctgaaagcatttccaaggagcaaatc 306
||||| || |||| ||| || |||||| ||||| ||||||||||||||
Sbjct: 202 atcctcctttcttaattccaggtctgaatgcattcccaaggagcaaatc 250
>gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 protein; n=1; Listeria
innocua|Rep: Lin0563 protein - Listeria innocua, partial
(5%)
Length = 655
Score = 192 bits (97), Expect = 9e-49
Identities = 196/224 (87%), Gaps = 5/224 (2%)
Strand = Plus / Plus
Query: 86 tttctcttccacagctcatagtttcccatctactgtcgtcatctcgcgtctctacttcct 145
||||||||||||||||||||||||| |||||||| |||||||||||||| | | ||||||
Sbjct: 40 tttctcttccacagctcatagtttctcatctactatcgtcatctcgcgtatgtccttcct 99
Query: 146 tcgattgcatcatcactgacgcttgccgttccgtgctcaaggagatttcgctcgccggaa 205
|| ||| ||||||| | |||||| | ||||| ||| ||||||||||||| ||||| ||||
Sbjct: 100 tc-attacatcatcgccgacgctcgtcgttctgtgttcaaggagatttcactcgctggaa 158
Query: 206 atggaggaaccagccatatttcgac-agctcccttcatctactgttgtttgctcatcctt 264
|||||||||||| ||| |||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct: 159 atggaggaaccaaccagatttcgacaagctcccttcatc-actgttgattgctcatcctt 217
Query: 265 ctctctt--tttctagatctgaaagcatttccaaggagcaaatc 306
|| |||| |||| ||||| ||| ||||| || |||||||||||
Sbjct: 218 ctttcttaatttccagatcggaatgcattccctaggagcaaatc 261
>gnl|LJGI|AV777990 similar to UniRef100_Q4RFJ5 Cluster: Chromosome 8 SCAF15119 whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep:, partial (1%)
Length = 247
Score = 188 bits (95), Expect = 1e-47
Identities = 170/191 (89%), Gaps = 3/191 (1%)
Strand = Plus / Plus
Query: 118 ctgtcgtcatctcgcgtctctacttccttcgattgcatcatcactgacgcttgccgttcc 177
||||||||||||||||||||| |||||||| ||||||||||| | |||||| ||||||||
Sbjct: 1 ctgtcgtcatctcgcgtctctgcttccttcaattgcatcatcgccgacgctcgccgttcc 60
Query: 178 gtgctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgac-agctcc 236
||| |||||||||||||||||||| ||||||||||||||| ||| |||||||| ||||||
Sbjct: 61 gtgttcaaggagatttcgctcgccagaaatggaggaaccaaccagatttcgacaagctcc 120
Query: 237 cttcatctactgttgtttgctcatccttctctctt-tttctagatctgaaagcatttcca 295
||||||| |||||||||| ||||||| || |||| ||| || |||||| ||||| |||
Sbjct: 121 cttcatc-actgttgtttaatcatcctcctttcttaattccaggtctgaatgcattccca 179
Query: 296 aggagcaaatc 306
|||||||||||
Sbjct: 180 aggagcaaatc 190
>gnl|LJGI|DC594505
Length = 357
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 174 ttccgtgctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagc 233
||||||| |||||||| ||| |||||| |||| ||| |||||||||||||||||||||||
Sbjct: 110 ttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttcgacagc 169
Query: 234 tcccttcatctactgttgtttg 255
||||||||| |||||||||||
Sbjct: 170 tcccttcattcactgttgtttg 191
>gnl|LJGI|DC594173
Length = 570
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 174 ttccgtgctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagc 233
||||||| |||||||| ||| |||||| |||| ||| |||||||||||||||||||||||
Sbjct: 83 ttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttcgacagc 142
Query: 234 tcccttcatctactgttgtttg 255
||||||||| |||||||||||
Sbjct: 143 tcccttcattcactgttgtttg 164
>gnl|LJGI|BW596036
Length = 485
Score = 99.6 bits (50), Expect = 1e-20
Identities = 74/82 (90%)
Strand = Plus / Plus
Query: 174 ttccgtgctcaaggagatttcgctcgccggaaatggaggaaccagccatatttcgacagc 233
||||||| |||||||| ||| |||||| |||| ||| |||||||||||||||||||||||
Sbjct: 96 ttccgtgttcaaggaggtttagctcgctggaactggtggaaccagccatatttcgacagc 155
Query: 234 tcccttcatctactgttgtttg 255
||||||||| |||||||||||
Sbjct: 156 tcccttcattcactgttgtttg 177
>gnl|LJGI|GO016325 similar to UniRef100_A7PPK0 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 910
Score = 83.8 bits (42), Expect = 6e-16
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 13 agctggcaatcacgtgtttcctctgccattctacccactccaccgtaccattcatcttct 72
||||||||||||||||||| |||| || |||||||||||||| ||||||||||||| |||
Sbjct: 618 agctggcaatcacgtgtttgctctccccttctacccactccatcgtaccattcatcatct 559
Query: 73 tc 74
||
Sbjct: 558 tc 557
>gnl|LJGI|DC597023 weakly similar to UniRef100_Q41848 Cluster: Prolin rich protein;
n=3; Zea mays|Rep: Prolin rich protein - Zea mays
(Maize), partial (6%)
Length = 471
Score = 65.9 bits (33), Expect = 1e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 30 ttcctctgccattctacccactccaccgtaccattcatcttcttctcttttcttgatttc 89
||||||| || ||||||| |||||||||||||||||||| ||||| |||| |||||||
Sbjct: 87 ttcctctccctttctacctactccaccgtaccattcatcaccttctgatttcgtgatttc 146
Query: 90 tcttc 94
|||||
Sbjct: 147 tcttc 151
>gnl|LJGI|BP047225 homologue to UniRef100_Q8HKU2 Cluster: NADH-ubiquinone
oxidoreductase chain 4L; n=1; Petroscirtes
breviceps|Rep: NADH-ubiquinone oxidoreductase chain 4L -
Petroscirtes breviceps (striped poison-fang blenny
mimic), partial (12%)
Length = 550
Score = 65.9 bits (33), Expect = 1e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 277 agatctgaaagcatttccaaggagcaaatcgcgggtgagcaatccttgg 325
|||||||| ||||| ||||||||||||||| |||||||||||||||||
Sbjct: 411 agatctgagtgcattcccaaggagcaaatcgtgggtgagcaatccttgg 459
>gnl|LJGI|TC67944
Length = 860
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 287 gcatttccaaggagcaaatcgcgggtgagcaatccttgg 325
||||| ||||||||||||||| |||||||||||||||||
Sbjct: 70 gcattcccaaggagcaaatcgtgggtgagcaatccttgg 108
>gnl|LJGI|AV771712
Length = 448
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 195 gctcgccggaaatggaggaaccagccatatttcgacagctcccttcatctactgttgt 252
||||| ||||||||| | ||||| ||||||||||||| |||| |||||| ||||||||
Sbjct: 312 gctcgtcggaaatggtgtaaccaaccatatttcgacacctcctttcatccactgttgt 255
>gnl|LJGI|GO018859 weakly similar to UniRef100_A8KC04 Cluster: Gnl2 protein; n=1;
Danio rerio|Rep: Gnl2 protein - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (3%)
Length = 765
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctct 270
||||||||||| ||||||||||||||||||
Sbjct: 216 atctactgttgcttgctcatccttctctct 245
>gnl|LJGI|FS331533
Length = 715
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctct 270
||||||||||| ||||||||||||||||||
Sbjct: 204 atctactgttgcttgctcatccttctctct 233
>gnl|LJGI|AU252148 similar to UniRef100_A5JPH2 Cluster: Transcription factor
Hau-Pax-beta1; n=1; Helobdella sp. MS-2000|Rep:
Transcription factor, partial (2%)
Length = 334
Score = 52.0 bits (26), Expect = 2e-06
Identities = 78/93 (83%), Gaps = 3/93 (3%)
Strand = Plus / Plus
Query: 7 aaccctagctggcaatcacgtgtttcctctgccattctacccactccaccgtaccattca 66
|||||||||||||||| |||||| ||||| || ||| |||||||| ||||||| |||
Sbjct: 6 aaccctagctggcaatggcgtgttgcctctccctctctgcccactccgccgtacctttcg 65
Query: 67 tcttcttctcttttctt-gatttctcttccaca 98
|| ||| ||||||||| |||||||||| ||||
Sbjct: 66 tcatct--tcttttcttagatttctctttcaca 96
>gnl|LJGI|TC74851 weakly similar to UniRef100_A7WM73 Cluster:
Beta-N-acetylhexosaminidase; n=2; Arabidopsis
thaliana|Rep: Beta-N-acetylhexosaminidase - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 764
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctc 269
||||||||||| |||||||||||||||||
Sbjct: 179 atctactgttgcttgctcatccttctctc 207
>gnl|LJGI|TC69945 weakly similar to UniRef100_A7WM73 Cluster:
Beta-N-acetylhexosaminidase; n=2; Arabidopsis
thaliana|Rep: Beta-N-acetylhexosaminidase - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 795
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctc 269
||||||||||| |||||||||||||||||
Sbjct: 278 atctactgttgcttgctcatccttctctc 306
>gnl|LJGI|TC65454 weakly similar to UniRef100_A7WM73 Cluster:
Beta-N-acetylhexosaminidase; n=2; Arabidopsis
thaliana|Rep: Beta-N-acetylhexosaminidase - Arabidopsis
thaliana (Mouse-ear cress), partial (5%)
Length = 1034
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctc 269
||||||||||| |||||||||||||||||
Sbjct: 263 atctactgttgcttgctcatccttctctc 291
>gnl|LJGI|TC64249
Length = 741
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctc 269
||||||||||| |||||||||||||||||
Sbjct: 262 atctactgttgcttgctcatccttctctc 290
>gnl|LJGI|TC59916
Length = 802
Score = 50.1 bits (25), Expect = 8e-06
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 241 atctactgttgtttgctcatccttctctc 269
||||||||||| |||||||||||||||||
Sbjct: 279 atctactgttgcttgctcatccttctctc 307