Miyakogusa Predicted Gene

Lj0g3v0158259.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0158259.1 CUFF.9786.1
         (510 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP048276 similar to UniRef100_A7P7R9 Cluster: Chromosom...   361   3e-99
gnl|LJGI|GO025651 similar to UniRef100_A7P7R9 Cluster: Chromosom...    62   4e-09

>gnl|LJGI|BP048276 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 498

 Score =  361 bits (182), Expect = 3e-99
 Identities = 187/189 (98%)
 Strand = Plus / Minus

                                                                       
Query: 322 tatgacatgatgagatcctacggtggtggtggtggcagctttggcggcacctccgctcgc 381
           |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 498 tatgacatgatgagatcctacgttggtggtggtgncagctttggcggcacctccgctcgc 439

                                                                       
Query: 382 cccggctggaaatccggtgattggatatgctccaggtctgggtgcaacgagcataacttt 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cccggctggaaatccggtgattggatatgctccaggtctgggtgcaacgagcataacttt 379

                                                                       
Query: 442 gctaatagaatggagtgctaccgatgcagtgcaccaagagactctaatggcggcaggtct 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gctaatagaatggagtgctaccgatgcagtgcaccaagagactctaatggcggcaggtct 319

                    
Query: 502 ccatattga 510
           |||||||||
Sbjct: 318 ccatattga 310


>gnl|LJGI|GO025651 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (55%)
          Length = 376

 Score = 61.9 bits (31), Expect = 4e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 241 aactgtggagctcacaactttgctagccgctctggctgcttcaagtgcggtgcacccaag 300
           |||||||| || ||||||||||||||||||||  |||||||||| || ||||||  ||||
Sbjct: 288 aactgtggtgcacacaactttgctagccgctcaagctgcttcaaatgtggtgcattcaag 347

                  
Query: 301 gaggact 307
           || ||||
Sbjct: 348 gatgact 354