Miyakogusa Predicted Gene

Lj0g3v0157819.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0157819.1 Non Chatacterized Hit- tr|I1KJV5|I1KJV5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22422 PE,72.13,8e-16,
,CUFF.9748.1
         (252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO024452 similar to UniRef100_Q94JR4 Cluster: AT4g29590...   230   3e-60
gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome...   230   3e-60

>gnl|LJGI|GO024452 similar to UniRef100_Q94JR4 Cluster: AT4g29590/T16L4_100; n=2;
           Arabidopsis thaliana|Rep: AT4g29590/T16L4_100 -
           Arabidopsis thaliana (Mouse-ear cress), partial (56%)
          Length = 721

 Score =  230 bits (116), Expect = 3e-60
 Identities = 169/188 (89%), Gaps = 9/188 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttttgggatttggggctgcttcattcctgtctcagtctatgaacatgtctggtgat 60
           ||||||||||||||||| |||||||||||| ||||||||| | ||  |||||||||||  
Sbjct: 205 atgcttttgggatttggagctgcttcattcttgtctcagtttgtgggcatgtctggtg-- 262

                                                                       
Query: 61  gtgggtggcaagtccttcattgcttctgcaaggataacgggtggtccctctgtggatgag 120
                  ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 -------gcaagtccttcattgcttctgcaaggataactggtggtccctctgtggatgag 315

                                                                       
Query: 121 atacttaaaaatgtggaatggccagagcagttccccttcaaggaggaggattttcagcga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 316 atacttaaaaatgtggaatggccagagcagttccccttcaaggaggaggatttcctgcga 375

                   
Query: 181 tatcatga 188
           ||| ||||
Sbjct: 376 tatgatga 383


>gnl|LJGI|TC58131 similar to UniRef100_A7PE95 Cluster: Chromosome chr11 scaffold_13,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_13, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 1142

 Score =  230 bits (116), Expect = 3e-60
 Identities = 169/188 (89%), Gaps = 9/188 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttttgggatttggggctgcttcattcctgtctcagtctatgaacatgtctggtgat 60
           ||||||||||||||||| |||||||||||| ||||||||| | ||  |||||||||||  
Sbjct: 156 atgcttttgggatttggagctgcttcattcttgtctcagtttgtgggcatgtctggtg-- 213

                                                                       
Query: 61  gtgggtggcaagtccttcattgcttctgcaaggataacgggtggtccctctgtggatgag 120
                  ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 214 -------gcaagtccttcattgcttctgcaaggataactggtggtccctctgtggatgag 266

                                                                       
Query: 121 atacttaaaaatgtggaatggccagagcagttccccttcaaggaggaggattttcagcga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 267 atacttaaaaatgtggaatggccagagcagttccccttcaaggaggaggatttcctgcga 326

                   
Query: 181 tatcatga 188
           ||| ||||
Sbjct: 327 tatgatga 334