Miyakogusa Predicted Gene

Lj0g3v0157699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0157699.1 Non Chatacterized Hit- tr|D8SBK6|D8SBK6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.62,1e-18,PROTEIN_KINASE_ST,Serine/threonine-protein kinase,
active site; PROTEIN_KINASE_DOM,Protein kinase, c,CUFF.9759.1
         (1497 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV410691 similar to UniRef100_A7QFQ4 Cluster: Chromosom...   289   3e-77

>gnl|LJGI|AV410691 similar to UniRef100_A7QFQ4 Cluster: Chromosome chr8 scaffold_88,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_88, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (26%)
          Length = 394

 Score =  289 bits (146), Expect = 3e-77
 Identities = 332/394 (84%)
 Strand = Plus / Plus

                                                                        
Query: 894  gaaaattcacaacaccggcattgttcaccgggatgtaaagcctgctaacttggtggttac 953
            ||||||||| || || ||||| |||||| ||||||||||||| || ||| | ||||||||
Sbjct: 1    gaaaattcataatacaggcatcgttcacagggatgtaaagccagccaacatagtggttac 60

                                                                        
Query: 954  caaacgggggcagataaaactcattgattttggtgcagcaactgacttaaggattggaaa 1013
            ||||||||| ||||| |||||||||||||||||||||||||| ||| |  ||||||||||
Sbjct: 61   caaacggggtcagattaaactcattgattttggtgcagcaacagacctgcggattggaaa 120

                                                                        
Query: 1014 gaattacgctcctgattttacgcctttggatcgcgactactgcccccctgaattatatgt 1073
            |||||| | |||  |    | || |||||||| |||||| || ||||| ||||| |||||
Sbjct: 121  gaattatgttcccaaccgcatgcttttggatcccgactattgtcccccagaattgtatgt 180

                                                                        
Query: 1074 gctaccagaagaaacaccaagtcttccatcagagccaattgcagctttactttcaccaat 1133
             || ||||||||||||||||||| |||  |||||||  |||| ||||| |||||||||||
Sbjct: 181  actcccagaagaaacaccaagtcctcctccagagcctgttgctgctttcctttcaccaat 240

                                                                        
Query: 1134 cttgtggcagttaaatagtcccgacctgttcgatatgtattctgctgggattgtactcat 1193
            | | ||||||||||| || || || ||||| ||||||||||||||||||||||||||| |
Sbjct: 241  cctctggcagttaaacagccctgatctgtttgatatgtattctgctgggattgtactcct 300

                                                                        
Query: 1194 gcaaatggcagtaccagccttgaggtctccagcaactttgaagaatttcaatctggaaat 1253
            |||||| ||| ||||  |||| |||||||| ||  ||||||||||||||||| |||||||
Sbjct: 301  gcaaatcgcaataccttccttaaggtctcctgctgctttgaagaatttcaatttggaaat 360

                                              
Query: 1254 aaaaacattcggatatgatttgaacaaatggagg 1287
            |||||| |  ||||| |||||||| || ||||||
Sbjct: 361  aaaaacctgtggatacgatttgaaaaagtggagg 394