Miyakogusa Predicted Gene
- Lj0g3v0157459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0157459.1 tr|G7KBR6|G7KBR6_MEDTR Transcription factor
X1-like protein OS=Medicago truncatula GN=MTR_5g079940
P,66.59,0,seg,NULL; zf-XS,Zinc finger-XS domain; XS,XS domain;
TRANSCRIPTION FACTOR X1-LIKE,NULL; RIBONUCLEASE,gene.g12062.t1.1
(2535 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320616 weakly similar to UniRef100_A7PIT9 Cluster: Ch... 634 0.0
gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chr... 549 e-155
gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome... 141 2e-32
gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Ch... 70 7e-11
>gnl|LJGI|FS320616 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (8%)
Length = 719
Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Plus
Query: 1 atggctcagttctctaaccaggacactgatataaggagtacatctcaattaagttggtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atggctcagttctctaaccaggacactgatataaggagtacatctcaattaagttggtgg 252
Query: 61 tatgtggttaaatcttacgaagaacttagaaagggggttcacaaggtgaaaacctcatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatgtggttaaatcttacgaagaacttagaaagggggttcacaaggtgaaaacctcatat 312
Query: 121 gagactttcagttgtccattctgccctgggagaaaacaggattataagtatgtggaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gagactttcagttgtccattctgccctgggagaaaacaggattataagtatgtggaactc 372
Query: 181 cttaatcatgcttctggggtgggtcggagtagttcagacaagagaagtgctgaagagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cttaatcatgcttctggggtgggtcggagtagttcagacaagagaagtgctgaagagaag 432
Query: 241 ggtaatcatctagctttagtgaaatatatggagaaggaccttatgagtatgggtggccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggtaatcatctagctttagtgaaatatatggagaaggaccttatgagtatgggtggccca 492
Query: 301 tcaaaacctgtagataaagg 320
||||||||||||||||||||
Sbjct: 493 tcaaaacctgtagataaagg 512
Score = 117 bits (59), Expect = 4e-25
Identities = 227/283 (80%)
Strand = Plus / Plus
Query: 371 catctcaaataagttggtggtatgtagatgcatcttacgaagagctcaaaaatggaagtc 430
|||||||| |||||||||||||||| | | |||||||||||| || | ||| || ||
Sbjct: 233 catctcaattaagttggtggtatgtggttaaatcttacgaagaacttagaaagggggttc 292
Query: 431 gaaatgtgaaaacatcagatgagactttaacctgtccgtactgccctaagaggaagcagg 490
|| |||||||| ||| |||||||||| | ||||| | ||||||| ||| || ||||
Sbjct: 293 acaaggtgaaaacctcatatgagactttcagttgtccattctgccctgggagaaaacagg 352
Query: 491 actatatgtacagggaactcctagaacatgcttatatggtgggacggagtagttccgaaa 550
| |||| ||| ||||||||| | ||||||| | |||||| ||||||||||| || |
Sbjct: 353 attataagtatgtggaactccttaatcatgcttctggggtgggtcggagtagttcagaca 412
Query: 551 agagaagtgctagagagagggctaatcatctggctttagtgaagtatttggaaaaggatc 610
||||||||||| ||||| || ||||||||| ||||||||||| ||| |||| ||||| |
Sbjct: 413 agagaagtgctgaagagaagggtaatcatctagctttagtgaaatatatggagaaggacc 472
Query: 611 tcatgagtatggatgggccttcaaaagttgttgataaaggtac 653
| |||||||||| ||| || |||||| ||| |||||||||||
Sbjct: 473 ttatgagtatgggtggcccatcaaaacctgtagataaaggtac 515
Score = 95.6 bits (48), Expect = 1e-18
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 318 aggcacaacatctgtaatggctcacttctttaacgaggatactgacgc 365
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 aggcacaacatctgtaatggctcacttctttaacgaggatactgacgc 719
Score = 79.8 bits (40), Expect = 8e-14
Identities = 94/112 (83%)
Strand = Plus / Plus
Query: 856 gaactccttgaacatgcttccggggtgggtcaaagtagttcagaaaagagaagtgtcaaa 915
||||||||| | |||||||| |||||||||| ||||||||||| |||||||||| ||
Sbjct: 367 gaactccttaatcatgcttctggggtgggtcggagtagttcagacaagagaagtgctgaa 426
Query: 916 gagagagcaactcatctagctttagtgaaatatttgaagatggatcttatga 967
|||| | | |||||||||||||||||||||| || ||| ||| |||||||
Sbjct: 427 gagaagggtaatcatctagctttagtgaaatatatggagaaggaccttatga 478
>gnl|LJGI|TC69299 weakly similar to UniRef100_A7PIT9 Cluster: Chromosome chr13
scaffold_17, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (54%)
Length = 1275
Score = 549 bits (277), Expect = e-155
Identities = 277/277 (100%)
Strand = Plus / Plus
Query: 2196 attaaaggagatggatgtagtatgcagtgaaattacagttcgcatagatactgtaaccgg 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attaaaggagatggatgtagtatgcagtgaaattacagttcgcatagatactgtaaccgg 60
Query: 2256 tgaaatagacaagctcactcagactcacagtcaagagatgaagaaaatacagtcaagtgc 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgaaatagacaagctcactcagactcacagtcaagagatgaagaaaatacagtcaagtgc 120
Query: 2316 aattcaacatgttcagagtgttttaaatggtcatgaaaggcttaagttgcaactggaata 2375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattcaacatgttcagagtgttttaaatggtcatgaaaggcttaagttgcaactggaata 180
Query: 2376 tcagaaaagagaacttgagtttcgaagaatcgaactgcaaaaacgtgagacacataatga 2435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tcagaaaagagaacttgagtttcgaagaatcgaactgcaaaaacgtgagacacataatga 240
Query: 2436 aagtgaaagaaaaaagttggaagaagatattatggag 2472
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagtgaaagaaaaaagttggaagaagatattatggag 277
>gnl|LJGI|TC78612 similar to UniRef100_A7PIT9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1863
Score = 141 bits (71), Expect = 2e-32
Identities = 197/239 (82%)
Strand = Plus / Plus
Query: 1906 gtggaattcaataaaaattggtcgggcttagataatgcattggcatttgaaagagcatac 1965
||||||||||| ||| | ||| | |||||||||||||| || || ||||||||||||||
Sbjct: 717 gtggaattcaaaaaagactggccaggcttagataatgcgttagcctttgaaagagcatat 776
Query: 1966 gaatcagatcatcatgggaaaaatgactggtttgctaataccacgcagaagtctggtctt 2025
|||| ||| |||||||||||||| || |||||||||||| | | |||| |||||||
Sbjct: 777 gaattagaacatcatgggaaaaaggattggtttgctaattctgaaccgaaggctggtcta 836
Query: 2026 tatgcatggattgctcgagctgatgactactatatgaacaatataattggggaacaactg 2085
||||| ||| |||| ||||| ||||||||| | | | || | ||||||||||| |||
Sbjct: 837 tatgcctgggttgcccgagcagatgactacaacaaaatgaacgtcattggggaacatctg 896
Query: 2086 cagaagatgggggatgtcataacaatacctgaacttatggaagaagaagctcgaaggca 2144
| |||||||| ||||||| ||| ||||||||||| || ||||||||||||||||||||
Sbjct: 897 cggaagatggctgatgtcaaaaccatacctgaactcattgaagaagaagctcgaaggca 955
Score = 105 bits (53), Expect = 1e-21
Identities = 104/121 (85%)
Strand = Plus / Plus
Query: 2346 tcatgaaaggcttaagttgcaactggaatatcagaaaagagaacttgagtttcgaagaat 2405
|||||| | |||||| ||||||||||||| ||||||||| | |||||||| |||| |||
Sbjct: 1157 tcatgagaagcttaaattgcaactggaatctcagaaaagcgtgcttgagttgcgaaaaat 1216
Query: 2406 cgaactgcaaaaacgtgagacacataatgaaagtgaaagaaaaaagttggaagaagatat 2465
||| || |||| || ||| |||||||||||||||||||||||||| ||| |||||||||
Sbjct: 1217 tgaattggaaaagcgcgaggcacataatgaaagtgaaagaaaaaagctggcagaagatat 1276
Query: 2466 t 2466
|
Sbjct: 1277 t 1277
Score = 101 bits (51), Expect = 2e-20
Identities = 102/119 (85%)
Strand = Plus / Plus
Query: 789 aacctcagatgagactttcatatgcccatactgccctaaaaagataaatcgggattatgt 848
||||||||||||||| |||| || ||||||||||||||||| | || ||||||||| |
Sbjct: 293 aacctcagatgagaccttcacttgtccatactgccctaaaaaaaggaaacgggattattt 352
Query: 849 gtacagagaactccttgaacatgcttccggggtgggtcaaagtagttcagaaaagagaa 907
|||| ||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||
Sbjct: 353 atacaatgaactccttcaacatgcttctggggtgggtcagagtggttcacaaaagagaa 411
Score = 95.6 bits (48), Expect = 1e-18
Identities = 167/206 (81%), Gaps = 3/206 (1%)
Strand = Plus / Plus
Query: 409 gaagagctcaaaaatggaagtcgaaatgtgaaaacatcagatgagactttaacctgtccg 468
||||| || ||||||||||||| ||||||||||| ||||||||||| || || |||||
Sbjct: 261 gaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagaccttcacttgtcca 320
Query: 469 tactgccct---aagaggaagcaggactatatgtacagggaactcctagaacatgcttat 525
||||||||| || ||||| | ||| ||| | |||| |||||||| ||||||||| |
Sbjct: 321 tactgccctaaaaaaaggaaacgggattatttatacaatgaactccttcaacatgcttct 380
Query: 526 atggtgggacggagtagttccgaaaagagaagtgctagagagagggctaatcatctggct 585
|||||| | |||| |||| ||||||||| || | ||| | |||||||||| ||||
Sbjct: 381 ggggtgggtcagagtggttcacaaaagagaaaggcaaaagaaaaggctaatcatttggcc 440
Query: 586 ttagtgaagtatttggaaaaggatct 611
|||||||| |||||||||||||||||
Sbjct: 441 ttagtgaaatatttggaaaaggatct 466
Score = 87.7 bits (44), Expect = 3e-16
Identities = 172/214 (80%), Gaps = 3/214 (1%)
Strand = Plus / Plus
Query: 1112 aactaaaaaatgggagtcacaatgtgaaaacctcagacgagactttcgcatgcccttact 1171
|||| |||||||| ||||| ||||||||||||||||| ||||| ||| | || || ||||
Sbjct: 265 aactgaaaaatggaagtcagaatgtgaaaacctcagatgagaccttcacttgtccatact 324
Query: 1172 gccctaataaaaagagaaaacgggattatgtgttacgggaaatccttgaacatgcatatg 1231
|||| |||||| || |||||||||||| | | ||| ||||| ||||||| | ||
Sbjct: 325 gccc---taaaaaaaggaaacgggattatttatacaatgaactccttcaacatgcttctg 381
Query: 1232 gggtgggtcggagtgactcaccaaatagaagtgccattgaaaaggccaatcatctggctt 1291
||||||||| ||||| |||| ||| |||| || | |||||||| |||||| |||| |
Sbjct: 382 gggtgggtcagagtggttcacaaaagagaaaggcaaaagaaaaggctaatcatttggcct 441
Query: 1292 tagtgaaatatttgaaaaatgatcttatgaatgg 1325
|||||||||||||| |||| ||||| | ||||||
Sbjct: 442 tagtgaaatatttggaaaaggatctaaagaatgg 475
Score = 71.9 bits (36), Expect = 2e-11
Identities = 87/104 (83%)
Strand = Plus / Plus
Query: 175 gaactccttaatcatgcttctggggtgggtcggagtagttcagacaagagaagtgctgaa 234
||||||||| | ||||||||||||||||||| |||| ||||| | ||||||| || ||
Sbjct: 360 gaactccttcaacatgcttctggggtgggtcagagtggttcacaaaagagaaaggcaaaa 419
Query: 235 gagaagggtaatcatctagctttagtgaaatatatggagaagga 278
|| |||| ||||||| | || |||||||||||| |||| |||||
Sbjct: 420 gaaaaggctaatcatttggccttagtgaaatatttggaaaagga 463
Score = 56.0 bits (28), Expect = 1e-06
Identities = 123/154 (79%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 1459 tatgaagaactcaaaaagggaagttacaaggtgaaagtctcggaagatactttcatgtgt 1518
||||||||||| ||||| |||||| | || |||||| ||| || || || |||| |||
Sbjct: 258 tatgaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagaccttcacttgt 317
Query: 1519 ccgtactgccctaatagaa---aacaggattatgtgtacagggaaatccttgcacatgct 1575
|| ||||||||||| | || ||| ||||||| | |||| ||| ||||| |||||||
Sbjct: 318 ccatactgccctaaaaaaaggaaacgggattatttatacaatgaactccttcaacatgct 377
Query: 1576 tctggggtgggtcagagtagcaaacaaaagagaa 1609
|||||||||||||||||| | |||||||||||
Sbjct: 378 tctggggtgggtcagagtggttcacaaaagagaa 411
>gnl|LJGI|BW596862 weakly similar to UniRef100_A7NYZ4 Cluster: Chromosome chr6
scaffold_3, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 490
Score = 69.9 bits (35), Expect = 7e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 409 gaagagctcaaaaatggaagtcgaaatgtgaaaacatcagatgagactttaacctgtccg 468
||||| || ||||||||||||| ||||||||||| ||||||||||| || || |||||
Sbjct: 255 gaagaactgaaaaatggaagtcagaatgtgaaaacctcagatgagaccttcacttgtcca 314
Query: 469 tactgccctaa 479
|||||||||||
Sbjct: 315 tactgccctaa 325
Score = 61.9 bits (31), Expect = 2e-08
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1112 aactaaaaaatgggagtcacaatgtgaaaacctcagacgagactttcgcatgcccttact 1171
|||| |||||||| ||||| ||||||||||||||||| ||||| ||| | || || ||||
Sbjct: 259 aactgaaaaatggaagtcagaatgtgaaaacctcagatgagaccttcacttgtccatact 318
Query: 1172 gccctaa 1178
|||||||
Sbjct: 319 gccctaa 325