Miyakogusa Predicted Gene

Lj0g3v0157179.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0157179.1 tr|F3LFW1|F3LFW1_9GAMM DNA topoisomerase OS=gamma
proteobacterium IMCC1989 GN=IMCC1989_194 PE=3 SV=1,28.89,2.8,
,CUFF.9711.1
         (298 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80902                                                      591   e-169
gnl|LJGI|TC81392 weakly similar to UniRef100_A7PM27 Cluster: Chr...   313   3e-85

>gnl|LJGI|TC80902 
          Length = 514

 Score =  591 bits (298), Expect = e-169
 Identities = 298/298 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtttgaatatagatcaaccacaacatacatattggtaaataatgtactgtcaatattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atgtttgaatatagatcaaccacaacatacatattggtaaataatgtactgtcaatattt 163

                                                                       
Query: 61  tctttacataactgtaagccaacaatcaagaagagcaaggtacctattaatggtggtgac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tctttacataactgtaagccaacaatcaagaagagcaaggtacctattaatggtggtgac 223

                                                                       
Query: 121 gaagcagtgtctatagtgcaggaaattgatgatgactatcaaactggagaactttttagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gaagcagtgtctatagtgcaggaaattgatgatgactatcaaactggagaactttttagt 283

                                                                       
Query: 181 gatgcatgtgatgaagacaataatgattctactacatcaaggtttgagagacttaagaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gatgcatgtgatgaagacaataatgattctactacatcaaggtttgagagacttaagaat 343

                                                                     
Query: 241 gaagatatgacacaaagtctcatagacgaaaggggttcttggatctgcttctgttagt 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaagatatgacacaaagtctcatagacgaaaggggttcttggatctgcttctgttagt 401


>gnl|LJGI|TC81392 weakly similar to UniRef100_A7PM27 Cluster: Chromosome chr14
            scaffold_21, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr14 scaffold_21, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (23%)
          Length = 1217

 Score =  313 bits (158), Expect = 3e-85
 Identities = 158/158 (100%)
 Strand = Plus / Plus

                                                                        
Query: 141  ggaaattgatgatgactatcaaactggagaactttttagtgatgcatgtgatgaagacaa 200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846  ggaaattgatgatgactatcaaactggagaactttttagtgatgcatgtgatgaagacaa 905

                                                                        
Query: 201  taatgattctactacatcaaggtttgagagacttaagaatgaagatatgacacaaagtct 260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906  taatgattctactacatcaaggtttgagagacttaagaatgaagatatgacacaaagtct 965

                                                  
Query: 261  catagacgaaaggggttcttggatctgcttctgttagt 298
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 966  catagacgaaaggggttcttggatctgcttctgttagt 1003



 Score = 73.8 bits (37), Expect = 5e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                
Query: 1   atgtttgaatatagatcaaccacaacatacatattgg 37
           |||||||||||||||||||||||||||||||||||||
Sbjct: 811 atgtttgaatatagatcaaccacaacatacatattgg 847