Miyakogusa Predicted Gene

Lj0g3v0156509.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0156509.2 tr|J7G2W3|J7G2W3_ROSRU TIR-NBS-LRR OS=Rosa rugosa
GN=ruRdr1A PE=4 SV=1,38.1,1.7,LRR_1,Leucine-rich repeat; L
domain-like,NULL; "Winged helix" DNA-binding domain,NULL; no
descriptio,CUFF.9686.2
         (822 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|CB829528 weakly similar to UniRef100_Q8W2C0 Cluster: Fu...   174   6e-43

>gnl|LJGI|CB829528 weakly similar to UniRef100_Q8W2C0 Cluster: Functional candidate
           resistance protein KR1; n=1; Glycine max|Rep: Functional
           candidate resistance protein KR1 - Glycine max
           (Soybean), partial (5%)
          Length = 188

 Score =  174 bits (88), Expect = 6e-43
 Identities = 160/184 (86%)
 Strand = Plus / Plus

                                                                       
Query: 445 ttaaccgaactaccgagcctaagtggagcaccattcttgaagaatctgtcccttgataac 504
           ||||| |||||||||| |||||||| |||||||||| ||| |||||||||||||||||||
Sbjct: 5   ttaactgaactaccgaacctaagtgcagcaccattcctgaggaatctgtcccttgataac 64

                                                                       
Query: 505 tgcacgaagttagttaaaattcatgattctgttgggtttctcgagaatctcaattgcttg 564
           ||| | |  ||||||| ||||||||| ||||| |||||||| |||||||||   |  |||
Sbjct: 65  tgcccaagtttagttacaattcatgaatctgtggggtttcttgagaatctccgctctttg 124

                                                                       
Query: 565 agcgccaaaggatgcacccagctagaagttctggtgccctgcatcaagttgacatctctt 624
           ||||| |||||||||||||||||| || || | || ||||||||||||||||||||||||
Sbjct: 125 agcgctaaaggatgcacccagctaaaaatttttgttccctgcatcaagttgacatctctt 184

               
Query: 625 gaaa 628
           ||||
Sbjct: 185 gaaa 188