Miyakogusa Predicted Gene

Lj0g3v0156239.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0156239.1 tr|F4ITP5|F4ITP5_ARATH TraB family protein
OS=Arabidopsis thaliana GN=At2g32340 PE=4 SV=1,40.71,2e-19,
,gene.Ljchr0_pseudomol_20120828.path1.gene15742.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO019130 similar to UniRef100_A7PXJ0 Cluster: Chromosom...   103   7e-22
gnl|LJGI|DC599224                                                      62   2e-09
gnl|LJGI|TC71725 similar to UniRef100_A7PXJ0 Cluster: Chromosome...    56   1e-07
gnl|LJGI|AV414154 similar to UniRef100_Q7V4A3 Cluster: 1,4-dihyd...    50   8e-06

>gnl|LJGI|GO019130 similar to UniRef100_A7PXJ0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 641

 Score =  103 bits (52), Expect = 7e-22
 Identities = 70/76 (92%)
 Strand = Plus / Plus

                                                                       
Query: 191 ttcctggctctgagtttcgagtggcatacgaagaagcaaacaagtatggtggtagagtgg 250
           |||||||||||||||||||||||||||| |||||||| | |||||| ||||| |||||| 
Sbjct: 441 ttcctggctctgagtttcgagtggcatatgaagaagctatcaagtacggtggcagagtga 500

                           
Query: 251 cacttggtgatcgccc 266
           ||||||||||||||||
Sbjct: 501 cacttggtgatcgccc 516


>gnl|LJGI|DC599224 
          Length = 564

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 185 gtgtcattcctggctctgagtttcgagtggcatacgaagaagcaaacaagtatggtggt 243
           |||||| |||||||||||||||| ||||| |||  || |||||||||||||||| ||||
Sbjct: 352 gtgtcaatcctggctctgagtttggagtgtcatgtgatgaagcaaacaagtatgttggt 410


>gnl|LJGI|TC71725 similar to UniRef100_A7PXJ0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (26%)
          Length = 783

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 3   gctgccggtggagctatccagaaacgtgctcttcctgtcgtgcgagtc 50
           |||||||| |||||| |||||||||||| || ||||| ||||||||||
Sbjct: 449 gctgccggaggagctctccagaaacgtgatcgtcctgacgtgcgagtc 496


>gnl|LJGI|AV414154 similar to UniRef100_Q7V4A3 Cluster: 1,4-dihydroxy-2-naphthoate
           (DHNA) octaprenyltransferase; UbiA prenyltranferase
           family; n=1; Prochlorococcus marinus str. MIT 9313|Rep:
           1,4-dihydroxy-2-naphthoate (DHNA) octaprenyltransferase;
           UbiA prenyltranferase family - Prochlorococcus marinus
           (strain MIT 9313), partial (5%)
          Length = 278

 Score = 50.1 bits (25), Expect = 8e-06
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 77  tctacgtcctcggcacctgtcacgtctctgagg 109
           ||||||| |||||||||||||||||||| ||||
Sbjct: 105 tctacgtgctcggcacctgtcacgtctccgagg 137