Miyakogusa Predicted Gene

Lj0g3v0156189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0156189.1 Non Chatacterized Hit- tr|E1Z2L9|E1Z2L9_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,31.94,2e-18,TraB,Pheromone shutdown, TraB; seg,NULL;
SUBFAMILY NOT NAMED,NULL; PHEROMONE SHUTDOWN PROTEIN,NULL,CUFF.9783.1
         (429 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO019130 similar to UniRef100_A7PXJ0 Cluster: Chromosom...   139   2e-32

>gnl|LJGI|GO019130 similar to UniRef100_A7PXJ0 Cluster: Chromosome chr12 scaffold_36,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_36, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 641

 Score =  139 bits (70), Expect = 2e-32
 Identities = 84/91 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcccctttggcataagacaaagttggtgtacaatttacttttccaagcagnnnnnnna 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||       |
Sbjct: 551 atgcccctttggcataagacaaagttggtgtacaatttacttttccaagcagttttttta 610

                                          
Query: 61  cccagctctgatgatcttaataaaatgctga 91
           |||||||||||||||||||||||||||||||
Sbjct: 611 cccagctctgatgatcttaataaaatgctga 641