Miyakogusa Predicted Gene
- Lj0g3v0155239.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0155239.1 Non Chatacterized Hit- tr|I1KSF7|I1KSF7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13726
PE,81.22,0,CELLULOSE SYNTHASE-RELATED,NULL; X-BOX TRANSCRIPTION
FACTOR-RELATED,NULL; seg,NULL; RING/U-box,NULL;,CUFF.9838.1
(1464 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC600085 weakly similar to UniRef100_O81368 Cluster: Se... 422 e-117
gnl|LJGI|TC77476 similar to UniRef100_A7QDH4 Cluster: Chromosome... 228 8e-59
gnl|LJGI|GO025876 similar to UniRef100_A7QDH4 Cluster: Chromosom... 123 3e-27
gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1... 107 2e-22
gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulo... 62 1e-08
gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome... 58 2e-07
gnl|LJGI|BU494216 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; ... 54 3e-06
>gnl|LJGI|DC600085 weakly similar to UniRef100_O81368 Cluster: Secondary xylem
cellulose synthase; n=2; Populus|Rep: Secondary xylem
cellulose synthase - Populus tremuloides (Quaking
aspen), partial (7%)
Length = 218
Score = 422 bits (213), Expect = e-117
Identities = 215/216 (99%)
Strand = Plus / Plus
Query: 23 tgatgcaatctggtgttcccctctgcaacatttgtggggaacaattgaagcatgatgata 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tgatgcaatctggtgttcccctctgcaacatttgtggggaacaattgaagcatgatgata 62
Query: 83 atgaggaggtgtttgtggcttgtcatgagtgtaatttcccaatttgcaaggcttgttttg 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 atgaggaggtgtttgtggcttgtcatgagtgtaatttcccaatttgcaaggcttgttttg 122
Query: 143 agcatgaaatcagtgagggccatagggtctgcttgagatgtagtactccctatggagaga 202
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 123 agcatgaaatcagtgagggccatanggtctgcttgagatgtagtactccctatggagaga 182
Query: 203 gagcaaaggatgatggagacgacgatggcataaaag 238
||||||||||||||||||||||||||||||||||||
Sbjct: 183 gagcaaaggatgatggagacgacgatggcataaaag 218
>gnl|LJGI|TC77476 similar to UniRef100_A7QDH4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 883
Score = 228 bits (115), Expect = 8e-59
Identities = 246/289 (85%), Gaps = 3/289 (1%)
Strand = Plus / Plus
Query: 439 gcacctaaggctgaaaatgagtcctcagctccaccagagcagcagatggaaggaatacag 498
||||||||||||||||||||| || ||||||||| ||||||||||||| ||| |||
Sbjct: 513 gcacctaaggctgaaaatgagatgccaattccaccagaacagcagatggaagaaatgcag 572
Query: 499 cccacagaagctgcttc---tctaccactttcagtacttattccattatcgaaaagcaaa 555
||||||| |||||| | | ||||||||||| |||||||| | || |||| |||
Sbjct: 573 tccacagaggctgctgcagctgagccactttcagtcattattccaatctcaaaaactaaa 632
Query: 556 gtggcaccctacagaactgtgatcatcatgcgactaataatcttggctcttttcattcat 615
| |||| |||||| ||| || ||||||||||| |||||||||| ||| ||| | |||
Sbjct: 633 ctctcaccatacagatttgttataatcatgcgactgataatcttgggtctcttcttccat 692
Query: 616 tatcgagttacaaatcctgttgatagcgcttttggtctttggttgacatctatcatctgt 675
||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 693 tatcgagttactcatcctgttgatagtgcttttggtctctggttgacatctatcatctgt 752
Query: 676 gagatctggtttgcattttcatgggtgttagatcagttccctaaatggt 724
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 753 gagatctggtttgcatttgcatgggtgttagatcagttccctaaatggt 801
Score = 107 bits (54), Expect = 2e-22
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 75 tgatgataatgaggaggtgtttgtggcttgtcatgagtgtaatttcccaatttgcaaggc 134
||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 168 tgatgctaatggagaggtgtttgtggcttgccatgagtgctatttcccaatttgcaaggc 227
Query: 135 ttgttttgagcatgaaatcagtgagggccatagggtctgcttgagatgtagtactcccta 194
|||| |||| ||||||||| |||||| | |||| |||| |||||||| | ||||||||
Sbjct: 228 ttgtgttgattatgaaatcaatgaggggcgcagggcctgcctgagatgtggcactcccta 287
Query: 195 tg 196
||
Sbjct: 288 tg 289
>gnl|LJGI|GO025876 similar to UniRef100_A7QDH4 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 579
Score = 123 bits (62), Expect = 3e-27
Identities = 107/122 (87%)
Strand = Plus / Plus
Query: 75 tgatgataatgaggaggtgtttgtggcttgtcatgagtgtaatttcccaatttgcaaggc 134
||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 120 tgatgctaatggagaggtgtttgtggcttgccatgagtgctatttcccaatttgcaaggc 179
Query: 135 ttgttttgagcatgaaatcagtgagggccatagggtctgcttgagatgtagtactcccta 194
|||| |||| ||||||||| |||||| | |||| ||||||||||||||| ||||||||
Sbjct: 180 ttgtgttgattatgaaatcaatgaggggcgcagggcctgcttgagatgtagcactcccta 239
Query: 195 tg 196
||
Sbjct: 240 tg 241
>gnl|LJGI|TC66434 similar to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia mangium|Rep:
CesA2 - Acacia mangium, partial (71%)
Length = 2954
Score = 107 bits (54), Expect = 2e-22
Identities = 213/266 (80%)
Strand = Plus / Plus
Query: 862 aatacagtgctttctatccttgccgttgactacccggttgaaaaagtatcttgttatgtg 921
||||| ||||| ||||| ||||| ||||||||||| || || || || || ||||||||
Sbjct: 1431 aatactgtgctatctattcttgctgttgactacccagtagataaggtctcctgttatgtc 1490
Query: 922 tcagacgatggtgctgcaatgctcacatttgagtctcttgtggagacagctgaatttgca 981
|| || ||||||||||| ||| | |||||||| |||| | |||||| | |||||| ||
Sbjct: 1491 tctgatgatggtgctgctatgttgacatttgaagctctggctgagacatcagaattttca 1550
Query: 982 aagaagtgggtgccattctgcaaaaagttttcaattgaaccaagagcacctgagtattac 1041
| ||| ||||| || |||||||| || | |||||||||||| |||||||||||| ||
Sbjct: 1551 aggaaatgggttcctttctgcaagaaatattcaattgaaccccgagcacctgagttctat 1610
Query: 1042 ttctcacaaaagattgactacctcaaggacaaagtgcaaccttcttttgtgaaggaacgc 1101
|| ||| | |||||||||||| | || || || || ||||| || ||||| || || ||
Sbjct: 1611 ttttcaaagaagattgactacttgaaagataaggttcaaccatcatttgtcaaagatcgt 1670
Query: 1102 agagcgatgaagagagactatgaaga 1127
||||| ||||||||||| ||||||||
Sbjct: 1671 agagcaatgaagagagaatatgaaga 1696
>gnl|LJGI|FS345328 homologue to UniRef100_Q6J8X2 Cluster: Cellulose synthase; n=1;
Populus tremula x Populus tremuloides|Rep: Cellulose
synthase - Populus tremula x Populus tremuloides, partial
(22%)
Length = 704
Score = 61.9 bits (31), Expect = 1e-08
Identities = 111/135 (82%), Gaps = 2/135 (1%)
Strand = Plus / Minus
Query: 1021 ccaagagcacctgagtattacttctcacaaaagattgactacctcaaggacaaagtgcaa 1080
||||| || |||||||| |||||||| | || ||||| ||| | ||||| || |||||
Sbjct: 461 ccaagggctcctgagtactacttctctgagaaaattgattacttgaaggataaggtgcag 402
Query: 1081 ccttcttttgtgaaggaacgcagagcgatgaagagagactatgaagagtataaggt-aag 1139
||| | |||||||||||| | || || ||||||||||| |||||||| | |||||| |||
Sbjct: 401 cctacatttgtgaaggaaagaagggctatgaagagagaatatgaagaatttaaggtgaag 342
Query: 1140 agttaatgctttggt 1154
| |||||||||||||
Sbjct: 341 a-ttaatgctttggt 328
>gnl|LJGI|TC82583 similar to UniRef100_A7PFP0 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 969
Score = 58.0 bits (29), Expect = 2e-07
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 664 tctatcatctgtgagatctggtttgcattttcatgggtgttagatcagttccctaaatgg 723
|||||||| |||||||||||||||||||| ||||| | | |||||||| || ||||||
Sbjct: 861 tctatcatttgtgagatctggtttgcattgacatggattcttgatcagtttcccaaatgg 920
Query: 724 tttcc 728
|||||
Sbjct: 921 tttcc 925
>gnl|LJGI|BU494216 homologue to UniRef100_Q6DUJ2 Cluster: CesA2; n=1; Acacia
mangium|Rep: CesA2 - Acacia mangium, partial (13%)
Length = 419
Score = 54.0 bits (27), Expect = 3e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 1420 aatcttgattgtgatcattacgttaacaacagcaaggcc 1458
||||||||||||||||| ||| | |||||||||||||||
Sbjct: 31 aatcttgattgtgatcactacataaacaacagcaaggcc 69