Miyakogusa Predicted Gene
- Lj0g3v0155229.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0155229.1 Non Chatacterized Hit- tr|I3J7C6|I3J7C6_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=WD,26.15,4e-18,WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; seg,NULL; WD40
repeats,WD,CUFF.9645.1
(1173 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58758 weakly similar to UniRef100_UPI0000162829 Clust... 1503 0.0
gnl|LJGI|TC80373 similar to UniRef100_A7QDH3 Cluster: Chromosome... 250 2e-65
gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Ma... 105 6e-22
gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Ma... 105 6e-22
>gnl|LJGI|TC58758 weakly similar to UniRef100_UPI0000162829 Cluster: transducin
family protein / WD-40 repeat family protein; n=1;
Arabidopsis thaliana|Rep: transducin family protein /
WD-40 repeat family protein - Arabidopsis thaliana,
partial (49%)
Length = 804
Score = 1503 bits (758), Expect = 0.0
Identities = 758/758 (100%)
Strand = Plus / Plus
Query: 1 atggcggagaaggaggctgagcagccgaagcttaatcctcagcctccggcggtgaagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atggcggagaaggaggctgagcagccgaagcttaatcctcagcctccggcggtgaagctc 106
Query: 61 aagcctcgacgactgaaaggccacaaagacagcacaaactgctgcattgcctcgcctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aagcctcgacgactgaaaggccacaaagacagcacaaactgctgcattgcctcgcctcaa 166
Query: 121 aatccgcacctcatcgtcacttccggcgatgatggttttgtttgctggtttgacttgcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aatccgcacctcatcgtcacttccggcgatgatggttttgtttgctggtttgacttgcga 226
Query: 181 tgcagtgatgaggcgcagctggttatggatgttagcaccgaagccgtggtgtccctgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgcagtgatgaggcgcagctggttatggatgttagcaccgaagccgtggtgtccctgtgt 286
Query: 241 ttcaagccagggaaggaagataatatctatgtctcatcgggaaaggaaatcaattgtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttcaagccagggaaggaagataatatctatgtctcatcgggaaaggaaatcaattgtttc 346
Query: 301 gatgtgcgcttggccaccgccaaatgggagccattggagagttataattataacaaagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gatgtgcgcttggccaccgccaaatgggagccattggagagttataattataacaaagag 406
Query: 361 gagataaacaaggttacatgtaattcaaggtcctcatttcttgctgctgcagatgatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gagataaacaaggttacatgtaattcaaggtcctcatttcttgctgctgcagatgatagt 466
Query: 421 ggtgaagtgaagataattgacattcgccagcaatgcttgcacaaaacactacgagctggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ggtgaagtgaagataattgacattcgccagcaatgcttgcacaaaacactacgagctggt 526
Query: 481 catacaagtatatgttcctcagtggaattccttccttggagatcctgggaagtaattagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 catacaagtatatgttcctcagtggaattccttccttggagatcctgggaagtaattagt 586
Query: 541 ggaggtcttgattcagcacttgtatggtgggacttctccaatgggcgccacaacaaaata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ggaggtcttgattcagcacttgtatggtgggacttctccaatgggcgccacaacaaaata 646
Query: 601 gcaaattttggtaatgtcagtagcagcaatgctggacagtgttacaatccttctttcatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gcaaattttggtaatgtcagtagcagcaatgctggacagtgttacaatccttctttcatt 706
Query: 661 catgcaatagctgttccagaaactgacatgatagataaattagacaagatatgtgcggtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 catgcaatagctgttccagaaactgacatgatagataaattagacaagatatgtgcggtt 766
Query: 721 gcagcgggtgcagttgttaatgtgattaatattgaagc 758
||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcagcgggtgcagttgttaatgtgattaatattgaagc 804
>gnl|LJGI|TC80373 similar to UniRef100_A7QDH3 Cluster: Chromosome chr10 scaffold_81,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_81, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 496
Score = 250 bits (126), Expect = 2e-65
Identities = 129/130 (99%)
Strand = Plus / Plus
Query: 1044 tgatatcctacatttgaacatcggcgtaccccaaaaagtcaattgtctctgtaccaccac 1103
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgatatcctacatttgaacatcggcgtaccccaaaaagtcaattgtctctgtaccaccac 60
Query: 1104 agctgatacagacaatcttgttgtgtgtgacacatctaaaaccgtgaaggtctattctgt 1163
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 agctgatacagacaatcttgttgtgtgtgacacatctaaaaccgtgaaggtgtattctgt 120
Query: 1164 aacatagttt 1173
||||||||||
Sbjct: 121 aacatagttt 130
>gnl|LJGI|FS338888 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 792
Score = 105 bits (53), Expect = 6e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 312 ggccaccgccaaatgggagccattggagagttataattataacaaagaggagataaacaa 371
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggccaccatcaaatgggagccattggagagttataattataacaaagaggagataaacaa 482
Query: 372 g 372
|
Sbjct: 483 g 483
>gnl|LJGI|GO010241 weakly similar to UniRef100_O81895 Cluster: Male sterility 2-like
protein; n=2; Arabidopsis thaliana|Rep: Male sterility
2-like protein - Arabidopsis thaliana (Mouse-ear cress),
partial (11%)
Length = 778
Score = 105 bits (53), Expect = 6e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 312 ggccaccgccaaatgggagccattggagagttataattataacaaagaggagataaacaa 371
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggccaccatcaaatgggagccattggagagttataattataacaaagaggagataaacaa 452
Query: 372 g 372
|
Sbjct: 453 g 453