Miyakogusa Predicted Gene
- Lj0g3v0155199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0155199.1 Non Chatacterized Hit- tr|B9FJY2|B9FJY2_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,35.82,5e-19,Tub_2,LURP1-like domain; Tubby C-terminal
domain-like,Tubby C-terminal-like domain; seg,NULL; TRANSL,CUFF.9592.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57495 similar to UniRef100_A7QNH2 Cluster: Chromosome... 1409 0.0
gnl|LJGI|GO023721 similar to UniRef100_A7QNH2 Cluster: Chromosom... 68 8e-11
>gnl|LJGI|TC57495 similar to UniRef100_A7QNH2 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 1012
Score = 1409 bits (711), Expect = 0.0
Identities = 711/711 (100%)
Strand = Plus / Plus
Query: 1 atgaggaggttgctttctaggttcaagtttctatcaagagcagtgcatgagggtgagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atgaggaggttgctttctaggttcaagtttctatcaagagcagtgcatgagggtgagcat 69
Query: 61 gagcatgagcatgatcatggggagagaaacaacaagtaccctatgacagaaggaggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gagcatgagcatgatcatggggagagaaacaacaagtaccctatgacagaaggaggtttg 129
Query: 121 tgcacaacaacatcactcacagtttggagaaaatcccttgtgattagttgtaaaggagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgcacaacaacatcactcacagtttggagaaaatcccttgtgattagttgtaaaggagga 189
Query: 181 ttcacagtgattgattcacatggaaatctggtgtatcgggttgacaattacatcttgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ttcacagtgattgattcacatggaaatctggtgtatcgggttgacaattacatcttgcac 249
Query: 241 ccagatgaagtcactctcatggacgcttcaggaaactctctcctcaccatgcgtcaccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccagatgaagtcactctcatggacgcttcaggaaactctctcctcaccatgcgtcaccgc 309
Query: 301 cgcaagaagcttgggttagtagatagttggtttgtatatgaaggggaaacagggaaactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgcaagaagcttgggttagtagatagttggtttgtatatgaaggggaaacagggaaactg 369
Query: 361 catataaagaggagcaagttaggcaacttaagaaagagtccagtttgttgtgtaaggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 catataaagaggagcaagttaggcaacttaagaaagagtccagtttgttgtgtaaggaag 429
Query: 421 cgtgtgaacattttaaatggcaattccggggttcaagcatgcgtgtaccgtgtagcaccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cgtgtgaacattttaaatggcaattccggggttcaagcatgcgtgtaccgtgtagcaccg 489
Query: 481 gattcagatgacaaagggcacgcgatgtttacggttgaaggctcttatgcagacaggacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gattcagatgacaaagggcacgcgatgtttacggttgaaggctcttatgcagacaggacg 549
Query: 541 tgtaaggtgttggatgagtacaagaaaaccgtagctgaaatcaagagaaaggaggcaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgtaaggtgttggatgagtacaagaaaaccgtagctgaaatcaagagaaaggaggcaaat 609
Query: 601 agcaaagatgtctctttcgggattgagatttttcagttaattgttcatcctgggtttgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 agcaaagatgtctctttcgggattgagatttttcagttaattgttcatcctgggtttgat 669
Query: 661 cctgcctttgccatgggactcgttttgctactggatcaaatgttttcataa 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cctgcctttgccatgggactcgttttgctactggatcaaatgttttcataa 720
>gnl|LJGI|GO023721 similar to UniRef100_A7QNH2 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 583
Score = 67.9 bits (34), Expect = 8e-11
Identities = 138/172 (80%), Gaps = 3/172 (1%)
Strand = Plus / Plus
Query: 178 ggattcacagtgattgattcacatggaaatctggtgtatcgggttgacaattacatcttg 237
||||||||||| |||||||| ||||||||||||| ||||| ||||| || |||||
Sbjct: 238 ggattcacagttattgattctaatggaaatctggtttatcgagttgataactacatgggc 297
Query: 238 cacccagatgaagtcactctcatggacgcttcaggaaactctctcctcaccatgcgtcac 297
| | | || || |||||||||||||||| |||||||| || ||||||||||| | |
Sbjct: 298 cgcactgaccaaatcactctcatggacgcctcaggaaaatccatcctcaccatgtg---c 354
Query: 298 cgccgcaagaagcttgggttagtagatagttggtttgtatatgaaggggaaa 349
||||||| ||||||||| || ||| ||| |||||| | |||||||| ||||
Sbjct: 355 cgccgcaggaagcttggattgttagttagctggtttatgtatgaaggtgaaa 406