Miyakogusa Predicted Gene
- Lj0g3v0154989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0154989.1 Non Chatacterized Hit- tr|I1K926|I1K926_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,72.18,0,WD40
repeat-like,WD40-repeat-containing domain; seg,NULL; no
description,WD40/YVTN repeat-like-conta,CUFF.9785.1
(3285 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosom... 1086 0.0
gnl|LJGI|GO023968 similar to UniRef100_A7P540 Cluster: Chromosom... 438 e-121
gnl|LJGI|BW595912 similar to UniRef100_A7P540 Cluster: Chromosom... 268 2e-70
gnl|LJGI|DN652295 homologue to UniRef100_A7P540 Cluster: Chromos... 167 6e-40
gnl|LJGI|BP054670 115 2e-24
>gnl|LJGI|FS361548 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (9%)
Length = 556
Score = 1086 bits (548), Expect = 0.0
Identities = 554/556 (99%)
Strand = Plus / Minus
Query: 740 tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tcctccagcaacgcatatattcacctcctgctgctttggactgtcttcgtgctctagcat 497
Query: 800 gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtcgagtcctgcttggtttagcaagagatgatattatagcacacatattgacaaagctac 437
Query: 860 aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aggttgggaagaagctgtcagaactaattagggattcaggcagtcagacacatggaacag 377
Query: 920 agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agcagggtaggtggcaagctgaactttcccaagctgcaatcgagttaattggggttgtca 317
Query: 980 ccaactcagggcatgcaagtacattggctgctacagatgcagctactcctaccttaaggc 1039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccaactcagggcatgcaagtacattggctgctacagatgcagctactcctaccttaaggc 257
Query: 1040 tcatagaaagagaagctatagctgctgccactcctatatcatacgattcgagggaacttt 1099
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcatagaaagagaagctatagctgctgccactcctatatcatacgattcgagggaacttt 197
Query: 1100 tacaacttattcatgaatacgtacgagcatctggattgtcacaaactgcttctatattgc 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tacaacttattcatgaatacgtacgagcatctggattgtcacaaactgcttctatattgc 137
Query: 1160 ttaaagaggctcagttgaaacctttgccatcattgattgctccatcttctcttgcacagc 1219
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 136 ttaaagaggctcagttgaaacctttgccatcatcgattgctccatcttctcttgcacagc 77
Query: 1220 caccctcaacacaggaagctccttcagtacagcttcaatggccttcaggtcgtgctcctg 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 caccctcaacacaggaagctccttcagtacagcttcaatggccttcaggtcgtgctcctg 17
Query: 1280 ggtttctgtcggacaa 1295
||||||||||||||||
Sbjct: 16 ggtttctgtcggacaa 1
>gnl|LJGI|GO023968 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (10%)
Length = 667
Score = 438 bits (221), Expect = e-121
Identities = 374/425 (88%)
Strand = Plus / Plus
Query: 2632 tctgagcctgttcatcgctttgatcagttcactgactatggtggtggaggctttcatcct 2691
|||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 26 tctgggcctgttcatcgctttgatcagttcacagactatgggggtggaggctttcatcct 85
Query: 2692 gctggcaatgaggttattataaactcagaagtctgggacctacgcaagttcagtctgctt 2751
||||||||||||||| |||||||||| ||||||||||| || ||||||||||| || ||
Sbjct: 86 gctggcaatgaggttgttataaactctgaagtctgggatctgcgcaagttcagacttcta 145
Query: 2752 cgtagtgtaccatcattagatcaaacagaaataacattcaatgcgcatggtgatgtgtta 2811
|| || || || |||||||||||||||| ||||||||||||||| | |||||||| |
Sbjct: 146 cgcagcgtgccttcattagatcaaacagcaataacattcaatgcacgcggtgatgtaatg 205
Query: 2812 tatgcaatcctgaggagaaaaatcgaggatgttatgtcagcagtcaacacacgtcgtgtc 2871
||||||||| |||||||||| | |||||||| |||||||||||| || |||||||||||
Sbjct: 206 tatgcaatcttgaggagaaatcttgaggatgtaatgtcagcagtccacgcacgtcgtgtc 265
Query: 2872 aagcatcctctttttgcagctttccgcacagtggacgcagtgaattattcagaaattgct 2931
||||||||||||||||||||||||||||||||||| ||| | |||||||| || ||||||
Sbjct: 266 aagcatcctctttttgcagctttccgcacagtggatgcaatcaattattcggacattgct 325
Query: 2932 actatcccagtggaccgctgtgttcttgatttcgcaaccgagcccacagattcaattgtt 2991
|||| ||| || || ||||||||||||||||||||||| || || ||||||||| |||||
Sbjct: 326 actacccctgttgatcgctgtgttcttgatttcgcaactgaaccaacagattcatttgtt 385
Query: 2992 gggttggttacaatggatgatcaagatgaaatgtttgcctcagccagaatctatgaaatt 3051
||| || | || |||||||||||| |||| |||| ||| ||||||||| | |||||||||
Sbjct: 386 gggctgataactatggatgatcaaaatgagatgtatgcatcagccagagtatatgaaatt 445
Query: 3052 ggtcg 3056
|||||
Sbjct: 446 ggtcg 450
>gnl|LJGI|BW595912 similar to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (8%)
Length = 486
Score = 268 bits (135), Expect = 2e-70
Identities = 321/383 (83%)
Strand = Plus / Plus
Query: 2684 ttcatcctgctggcaatgaggttattataaactcagaagtctgggacctacgcaagttca 2743
|||||||||||||||||||||||||||| |||| ||||||||||| || |||||||| |
Sbjct: 12 ttcatcctgctggcaatgaggttattatcaactttgaagtctgggatctgcgcaagttta 71
Query: 2744 gtctgcttcgtagtgtaccatcattagatcaaacagaaataacattcaatgcgcatggtg 2803
| || || | | || || || |||||||||||| ||||||||||||||| | |||||
Sbjct: 72 gacttctacacatcgtgccttccttagatcaaacatcaataacattcaatgctcgtggtg 131
Query: 2804 atgtgttatatgcaatcctgaggagaaaaatcgaggatgttatgtcagcagtcaacacac 2863
|||| ||||||||||| | |||||||| | |||||||| | |||||||||| ||||||
Sbjct: 132 atgtaatatatgcaatcttaaggagaaatcttgaggatgtaacgtcagcagtccacacac 191
Query: 2864 gtcgtgtcaagcatcctctttttgcagctttccgcacagtggacgcagtgaattattcag 2923
| ||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||| |
Sbjct: 192 gccgtgtcaagcatcctctatttgcagctttccgcacagtggatgcaatcaattattctg 251
Query: 2924 aaattgctactatcccagtggaccgctgtgttcttgatttcgcaaccgagcccacagatt 2983
| |||||||||| || || || || |||||||||||||| ||||| ||||| |||||||
Sbjct: 252 acattgctactacccttgttgatcgttgtgttcttgattttgcaactgagccaacagatt 311
Query: 2984 caattgttgggttggttacaatggatgatcaagatgaaatgtttgcctcagccagaatct 3043
|| ||| |||| || | || |||||||||||| ||| |||| ||| |||||||| | |
Sbjct: 312 catttgctgggctgataactttggatgatcaaggtgagatgtatgcatcagccagggtat 371
Query: 3044 atgaaattggtcgtaggaggcca 3066
||||||||||||| ||||||||
Sbjct: 372 atgaaattggtcgacggaggcca 394
>gnl|LJGI|DN652295 homologue to UniRef100_A7P540 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (3%)
Length = 188
Score = 167 bits (84), Expect = 6e-40
Identities = 147/168 (87%)
Strand = Plus / Minus
Query: 1866 caactcagagcgtatgacattagattctatagttgttcaatatctgaagcatcagcatct 1925
|||||| |||||| | ||||| |||||| |||| ||||| |||||||||||||||||||
Sbjct: 186 caactctgagcgtgtaacattggattctctagtggttcagtatctgaagcatcagcatcg 127
Query: 1926 ccaatgcccagctcctattaccactcttcctccactatctctattacatcctcatgtttg 1985
||||||||| ||||| |||||||| ||||||||||| ||||| |||| || ||||||||
Sbjct: 126 ccaatgccccgctcccattaccacacttcctccactgtctcttctacacccacatgtttg 67
Query: 1986 tcctgaacccaagcgaagccttgatgctgcttctaatgtgacagctcg 2033
||| ||||| ||||||||||||||||| ||||||||||| |||||||
Sbjct: 66 tccggaacctaagcgaagccttgatgccccttctaatgtgtcagctcg 19
>gnl|LJGI|BP054670
Length = 367
Score = 115 bits (58), Expect = 2e-24
Identities = 61/62 (98%)
Strand = Plus / Minus
Query: 3224 gagatttcatcatggacttccaaggaggaactgacatattggacatggtatcagaaggtg 3283
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gagatttcatcatggacttcccaggaggaactgacatattggacatggtatcagaaggtg 156
Query: 3284 at 3285
||
Sbjct: 155 at 154
Score = 54.0 bits (27), Expect = 6e-06
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 3139 cctcttttaggccctggatttggagac 3165
|||||||||||||||||||||||||||
Sbjct: 300 cctcttttaggccctggatttggagac 274