Miyakogusa Predicted Gene
- Lj0g3v0154819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0154819.1 tr|G7I803|G7I803_MEDTR RING finger family protein
OS=Medicago truncatula GN=MTR_1g082550 PE=2 SV=1,69.79,0,PUTATIVE
UNCHARACTERIZED PROTEIN,NULL; RING FINGER PROTEIN 11 (SID 1669) (NEDD4
WW DOMAIN-BINDING PR,CUFF.9570.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72704 homologue to UniRef100_Q2HTN3 Cluster: Zinc fin... 1378 0.0
gnl|LJGI|TC72428 similar to UniRef100_Q84KA9 Cluster: RING/C3HC4... 874 0.0
gnl|LJGI|BW620608 similar to UniRef100_Q84KA9 Cluster: RING/C3HC... 739 0.0
gnl|LJGI|TC76787 weakly similar to UniRef100_Q84KA9 Cluster: RIN... 531 e-150
gnl|LJGI|BW621010 similar to UniRef100_Q2HTN3 Cluster: Zinc fing... 137 2e-31
gnl|LJGI|TC74246 similar to UniRef100_Q2HTN3 Cluster: Zinc finge... 137 2e-31
>gnl|LJGI|TC72704 homologue to UniRef100_Q2HTN3 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (36%)
Length = 758
Score = 1378 bits (695), Expect = 0.0
Identities = 695/695 (100%)
Strand = Plus / Plus
Query: 1 atgaacaaccaccacaatggagccaccaccaccaccctttgcttcttcctcctccttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgaacaaccaccacaatggagccaccaccaccaccctttgcttcttcctcctccttgtt 123
Query: 61 ctcatctcccccctcaccaaagcacaatcaacaaacaacaacgaaaatgatccctactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ctcatctcccccctcaccaaagcacaatcaacaaacaacaacgaaaatgatccctactac 183
Query: 121 aaccgtgtgagtccttccctggcgatcataatcgtcatccttatcgcagctctcttcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aaccgtgtgagtccttccctggcgatcataatcgtcatccttatcgcagctctcttcctc 243
Query: 181 atgggcttcttctctatctacatccgacactgctccgactccccctcagccagcatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 atgggcttcttctctatctacatccgacactgctccgactccccctcagccagcatccgc 303
Query: 241 aacctcaccggcgctgccggccgttcccgccgcggcgcgcgcggcctcgaccctgccgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 aacctcaccggcgctgccggccgttcccgccgcggcgcgcgcggcctcgaccctgccgtc 363
Query: 301 atcgaaacattccccaccctggaatactccgcggtgaaggatcacaaaatcggaaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 atcgaaacattccccaccctggaatactccgcggtgaaggatcacaaaatcggaaaaggc 423
Query: 361 gcgctagagtgcgcggtttgcctcaacgaattcgaggacaccgaaacgctgcgtttgatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gcgctagagtgcgcggtttgcctcaacgaattcgaggacaccgaaacgctgcgtttgatc 483
Query: 421 cccaagtgcgaccatgtcttccacccggagtgcatcgacgagtggttatcctcccactcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 cccaagtgcgaccatgtcttccacccggagtgcatcgacgagtggttatcctcccactcc 543
Query: 481 acctgccctgtctgcagagctaatctcactcctcagcccggcgattcagtgcgcggagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acctgccctgtctgcagagctaatctcactcctcagcccggcgattcagtgcgcggagtt 603
Query: 541 ccggttctcgccgccggcgaaccggaagacgtcgaggcacaaaacgacgctgttccggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 ccggttctcgccgccggcgaaccggaagacgtcgaggcacaaaacgacgctgttccggat 663
Query: 601 cagcagcaacaaactgcagcagatgctacggctgaaccggatgtgaattgcttgaaccag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cagcagcaacaaactgcagcagatgctacggctgaaccggatgtgaattgcttgaaccag 723
Query: 661 acgctgagccggaacagaaccaaaggatcacggtc 695
|||||||||||||||||||||||||||||||||||
Sbjct: 724 acgctgagccggaacagaaccaaaggatcacggtc 758
>gnl|LJGI|TC72428 similar to UniRef100_Q84KA9 Cluster: RING/C3HC4/PHD zinc
finger-like protein; n=2; Cucumis melo|Rep:
RING/C3HC4/PHD zinc finger-like protein - Cucumis melo
(Muskmelon), partial (32%)
Length = 488
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 28 accaccaccctttgcttcttcctcctccttgttctcatctcccccctcaccaaagcacaa 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 accaccaccctttgcttcttcctcctccttgttctcatctcccccctcaccaaagcacaa 107
Query: 88 tcaacaaacaacaacgaaaatgatccctactacaaccgtgtgagtccttccctggcgatc 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tcaacaaacaacaacgaaaatgatccctactacaaccgtgtgagtccttccctggcgatc 167
Query: 148 ataatcgtcatccttatcgcagctctcttcctcatgggcttcttctctatctacatccga 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ataatcgtcatccttatcgcagctctcttcctcatgggcttcttctctatctacatccga 227
Query: 208 cactgctccgactccccctcagccagcatccgcaacctcaccggcgctgccggccgttcc 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 cactgctccgactccccctcagccagcatccgcaacctcaccggcgctgccggccgttcc 287
Query: 268 cgccgcggcgcgcgcggcctcgaccctgccgtcatcgaaacattccccaccctggaatac 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cgccgcggcgcgcgcggcctcgaccctgccgtcatcgaaacattccccaccctggaatac 347
Query: 328 tccgcggtgaaggatcacaaaatcggaaaaggcgcgctagagtgcgcggtttgcctcaac 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tccgcggtgaaggatcacaaaatcggaaaaggcgcgctagagtgcgcggtttgcctcaac 407
Query: 388 gaattcgaggacaccgaaacgctgcgtttgatccccaagtgcgaccatgtcttccacccg 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gaattcgaggacaccgaaacgctgcgtttgatccccaagtgcgaccatgtcttccacccg 467
Query: 448 gagtgcatcgacgagtggtta 468
|||||||||||||||||||||
Sbjct: 468 gagtgcatcgacgagtggtta 488
>gnl|LJGI|BW620608 similar to UniRef100_Q84KA9 Cluster: RING/C3HC4/PHD zinc
finger-like protein; n=2; Cucumis melo|Rep:
RING/C3HC4/PHD zinc finger-like protein - Cucumis melo
(Muskmelon), partial (23%)
Length = 485
Score = 739 bits (373), Expect = 0.0
Identities = 376/377 (99%)
Strand = Plus / Plus
Query: 1 atgaacaaccaccacaatggagccaccaccaccaccctttgcttcttcctcctccttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 atgaacaaccaccacaatggagccaccaccaccaccctttgcttcttcctcctccttgtt 168
Query: 61 ctcatctcccccctcaccaaagcacaatcaacaaacaacaacgaaaatgatccctactac 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 169 ctcatctcccccctcaccaaagcacaatcaacaaacaacaacgaaaatgacccctactac 228
Query: 121 aaccgtgtgagtccttccctggcgatcataatcgtcatccttatcgcagctctcttcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aaccgtgtgagtccttccctggcgatcataatcgtcatccttatcgcagctctcttcctc 288
Query: 181 atgggcttcttctctatctacatccgacactgctccgactccccctcagccagcatccgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgggcttcttctctatctacatccgacactgctccgactccccctcagccagcatccgc 348
Query: 241 aacctcaccggcgctgccggccgttcccgccgcggcgcgcgcggcctcgaccctgccgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aacctcaccggcgctgccggccgttcccgccgcggcgcgcgcggcctcgaccctgccgtc 408
Query: 301 atcgaaacattccccaccctggaatactccgcggtgaaggatcacaaaatcggaaaaggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atcgaaacattccccaccctggaatactccgcggtgaaggatcacaaaatcggaaaaggc 468
Query: 361 gcgctagagtgcgcggt 377
|||||||||||||||||
Sbjct: 469 gcgctagagtgcgcggt 485
>gnl|LJGI|TC76787 weakly similar to UniRef100_Q84KA9 Cluster: RING/C3HC4/PHD zinc
finger-like protein; n=2; Cucumis melo|Rep:
RING/C3HC4/PHD zinc finger-like protein - Cucumis melo
(Muskmelon), partial (10%)
Length = 488
Score = 531 bits (268), Expect = e-150
Identities = 268/268 (100%)
Strand = Plus / Plus
Query: 822 attgcatcgggcgaggagcttgattatcttgcctagagaaactagctcacggcggggata 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 attgcatcgggcgaggagcttgattatcttgcctagagaaactagctcacggcggggata 62
Query: 882 tcgaaccggtggcggggaggggagtagcagggggaagtcttctaggcggttggaccgggg 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tcgaaccggtggcggggaggggagtagcagggggaagtcttctaggcggttggaccgggg 122
Query: 942 ttttaaatcagaccggtgggttttcaccatggcgccgccgttcctagttagagcgtcgtc 1001
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttttaaatcagaccggtgggttttcaccatggcgccgccgttcctagttagagcgtcgtc 182
Query: 1002 aattaggtccccgagggtgggtaatagcgccggtgaaggaacatccgcttctacgccgcc 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aattaggtccccgagggtgggtaatagcgccggtgaaggaacatccgcttctacgccgcc 242
Query: 1062 gccaccggtggcgcgccttccagtttaa 1089
||||||||||||||||||||||||||||
Sbjct: 243 gccaccggtggcgcgccttccagtttaa 270
>gnl|LJGI|BW621010 similar to UniRef100_Q2HTN3 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (31%)
Length = 543
Score = 137 bits (69), Expect = 2e-31
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 277 gcgcgcggcctcgaccctgccgtcatcgaaacattccccaccctggaatactccgcggtg 336
||||| |||||||||| |||||||||| || ||||| |||||||||||||| |||
Sbjct: 319 gcgcgtggcctcgaccaaaccgtcatcgacacgttccctgtcctggaatactccgaggtc 378
Query: 337 aaggatcacaaaatcggaaaaggcgcgctagagtgcgcggtttgcctcaacgaattcgag 396
|| | ||||| |||||||| |||||| |||||||| |||||| | | |||||||||
Sbjct: 379 aaagcacacaagatcggaaagcacgcgctcgagtgcgccgtttgcttgagcgaattcgaa 438
Query: 397 gacaccgaaacgctgcgtttgatccccaagtgcgaccatgtcttccacccggagtgcatc 456
||| | |||||||||||||||||||| |||||||||||||| |||||| | |||||||||
Sbjct: 439 gacgctgaaacgctgcgtttgatcccaaagtgcgaccatgttttccacaccgagtgcatc 498
Query: 457 gacgagtgg 465
|||||||||
Sbjct: 499 gacgagtgg 507
Score = 71.9 bits (36), Expect = 8e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 151 atcgtcatccttatcgcagctctcttcctcatgggcttcttctctatctacatccg 206
|||||||| || |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 199 atcgtcatactcgtcgctgctctcttcctcatgggcttcttctccatctacatccg 254
>gnl|LJGI|TC74246 similar to UniRef100_Q2HTN3 Cluster: Zinc finger, RING-type; n=1;
Medicago truncatula|Rep: Zinc finger, RING-type -
Medicago truncatula (Barrel medic), partial (81%)
Length = 1559
Score = 137 bits (69), Expect = 2e-31
Identities = 159/189 (84%)
Strand = Plus / Plus
Query: 277 gcgcgcggcctcgaccctgccgtcatcgaaacattccccaccctggaatactccgcggtg 336
||||| |||||||||| |||||||||| || ||||| |||||||||||||| |||
Sbjct: 430 gcgcgtggcctcgaccaaaccgtcatcgacacgttccctgtcctggaatactccgaggtc 489
Query: 337 aaggatcacaaaatcggaaaaggcgcgctagagtgcgcggtttgcctcaacgaattcgag 396
|| | ||||| |||||||| |||||| |||||||| |||||| | | |||||||||
Sbjct: 490 aaagcacacaagatcggaaagcacgcgctcgagtgcgccgtttgcttgagcgaattcgaa 549
Query: 397 gacaccgaaacgctgcgtttgatccccaagtgcgaccatgtcttccacccggagtgcatc 456
||| | |||||||||||||||||||| |||||||||||||| |||||| | |||||||||
Sbjct: 550 gacgctgaaacgctgcgtttgatcccaaagtgcgaccatgttttccacaccgagtgcatc 609
Query: 457 gacgagtgg 465
|||||||||
Sbjct: 610 gacgagtgg 618
Score = 71.9 bits (36), Expect = 8e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 151 atcgtcatccttatcgcagctctcttcctcatgggcttcttctctatctacatccg 206
|||||||| || |||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 310 atcgtcatactcgtcgctgctctcttcctcatgggcttcttctccatctacatccg 365
Score = 67.9 bits (34), Expect = 1e-10
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 724 cactcgacaggtcattcgttggttcaaccaggtgaggacaccgagcggttcactctgagg 783
|||||||| ||||||||| ||||||||||||||||| |||| || |||||||| |||||
Sbjct: 886 cactcgaccggtcattcgctggttcaaccaggtgagaacacggaccggttcaccttgagg 945
Query: 784 ct 785
||
Sbjct: 946 ct 947
Score = 65.9 bits (33), Expect = 5e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 910 agggggaagtcttctaggcggttggaccggggttttaaatcagaccggtgggttttc 966
||||||||| |||| ||||||||||||| ||| | |||||| |||||||||||||||
Sbjct: 1069 agggggaaggcttcgaggcggttggaccaggggtctaaatcggaccggtgggttttc 1125