Miyakogusa Predicted Gene

Lj0g3v0154349.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0154349.1 tr|J0DRM1|J0DRM1_LOALO Leucine-rich
repeat-containing protein 1 OS=Loa loa PE=4
SV=1,34.73,6e-19,Leucine-rich repeats, typical (most
populate,Leucine-rich repeat, typical subtype; Leucine-rich
repe,CUFF.9535.1
         (840 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64751 similar to UniRef100_A7PDF2 Cluster: Chromosome...  1649   0.0  
gnl|LJGI|AV415521                                                      54   1e-06

>gnl|LJGI|TC64751 similar to UniRef100_A7PDF2 Cluster: Chromosome chr17 scaffold_12,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_12, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (78%)
          Length = 1343

 Score = 1649 bits (832), Expect = 0.0
 Identities = 838/840 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgggttgtttcgccagcaaaaacgctgacaccaaagccagtagaaccgcgcggtggcga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 atgggttgtttcgccagcaaaaacgctgacaccaaagccagtagaaccgcgcggtggcga 190

                                                                       
Query: 61  tccaccggcattgttgctctgcgcgattccaaattgaagacatttccagatgaaattctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tccaccggcattgttgctctgcgcgattccaaattgaagacatttccagatgaaattctt 250

                                                                       
Query: 121 gatttagacagatcagtacgcacccttgacttaacacataatcgaatagttgacattccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gatttagacagatcagtacgcacccttgacttaacacataatcgaatagttgacattccc 310

                                                                       
Query: 181 ctggaaattagcaaattagttaatgtgcagcgcctggtattagcagacaacctcattgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctggaaattagcaaattagttaatgtgcagcgcctggtattagcagacaacctcattgag 370

                                                                       
Query: 241 agactgccagtgaatttggggaaactccaatctctaaaactcgtgaaccttgatggaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agactgccagtgaatttggggaaactccaatctctaaaactcgtgaaccttgatggaaat 430

                                                                       
Query: 301 cgaattacgtccttgccagatgaattgggccagttagtaaggcttgaacgcttatcgatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 cgaattacgtccttgccagatgaattgggccagttagtaaggcttgaacgcttatcgatc 490

                                                                       
Query: 361 tcagggaatttgttgacatccttgccagaaactattggcagtttgagaaatttgttgatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcagggaatttgttgacatccttgccagaaactattggcagtttgagaaatttgttgatt 550

                                                                       
Query: 421 ttaaacgtgtcaaataacaagttaaagtctcttccagaatccgttgggagttgcttctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ttaaacgtgtcaaataacaagttaaagtctcttccagaatccgttgggagttgcttctct 610

                                                                       
Query: 481 ttggaagaactacaagctgatgataatcttattgaagatcttccctcttctgtgtgcaat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttggaagaactacaagctgatgataatcttattgaagatcttccctcttctgtgtgcaat 670

                                                                       
Query: 541 ctctcccacttgaagtcactttccttagataacaataaagtgaagcagattcctccgaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ctctcccacttgaagtcactttccttagataacaataaagtgaagcagattcctccgaat 730

                                                                       
Query: 601 ctattgaaggactgcaaaactcttcagaacatatcactgcatggaaatcctatatcaatg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ctattgaaggactgcaaaactcttcagaacatatcactgcatggaaatcctatatcaatg 790

                                                                       
Query: 661 gatcaatttcaacagatggatgggtttcaagagtttgaagggaggaggagaaagaagttt 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 gatcaatttcaacagatggatgggtttcaagagtttgaagggaggaggagaaagaagttt 850

                                                                       
Query: 721 gacaaacagattgattcaaatgtgatgatcagttccaaaggtcttgatgagggcgtcgat 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gacaaacagattgattcaaatgtgatgatcagttccaaaggtcttgatgagggcgtcgat 910

                                                                       
Query: 781 ctatggagttgtctcaggcttgttgagaccacttgcgatgtggatttttcagttatatag 840
           ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 911 ctatgaagttgtctcaggcttgttgagaccacttgcaatgtggatttttcagttatatag 970


>gnl|LJGI|AV415521 
          Length = 384

 Score = 54.0 bits (27), Expect = 1e-06
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 168 agttgacattcccctggaaattagcaaattagttaatgtgcag 210
           ||||||||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 100 agttgacattcccgtggaatttagcaaattaattaaagtgcag 142