Miyakogusa Predicted Gene
- Lj0g3v0153829.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0153829.1 tr|Q0DFK5|Q0DFK5_ORYSJ Os05g0585400 protein
OS=Oryza sativa subsp. japonica GN=Os05g0585400 PE=2 SV=,30.77,4e-17,
,CUFF.9519.1
(633 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP033938 weakly similar to UniRef100_Q8S8M5 Cluster: Pr... 387 e-107
gnl|LJGI|AU251492 similar to UniRef100_A7PZP6 Cluster: Chromosom... 361 3e-99
gnl|LJGI|TC64790 homologue to UniRef100_A7PZP6 Cluster: Chromoso... 178 3e-44
gnl|LJGI|TC73329 similar to UniRef100_A7PZP6 Cluster: Chromosome... 135 4e-31
>gnl|LJGI|BP033938 weakly similar to UniRef100_Q8S8M5 Cluster: Protein ABIL1; n=2;
Arabidopsis thaliana|Rep: Protein ABIL1 - Arabidopsis
thaliana (Mouse-ear cress), partial (14%)
Length = 479
Score = 387 bits (195), Expect = e-107
Identities = 210/215 (97%)
Strand = Plus / Minus
Query: 419 gagttcctacttctagtatacccatgcaaaatttcggtggcacccacagggatgcattgg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gagttcctacttctagtatacccatgcaaaatttcggtggcacccacagggatgcattgg 420
Query: 479 agggttccagaccattgacaggattcaggtcatttgacaacccaaatcgccatgagactg 538
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 419 agggttccagacccttgacaggattcaggtcatttgacaaccccaatcgccatgagactg 360
Query: 539 tccaaacccctggtcgcagcagaagtgtgctatcagctttctttgtgaagcaaaaaacac 598
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 359 tcccaacccctggtcgcagcagaagtgtgctatcagctttctttgtgaagccaaaaacac 300
Query: 599 caaaattgaaggctggtggttctttctcatgattc 633
| |||||||||||||||||||||||||||||||||
Sbjct: 299 ccaaattgaaggctggtggttctttctcatgattc 265
>gnl|LJGI|AU251492 similar to UniRef100_A7PZP6 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 376
Score = 361 bits (182), Expect = 3e-99
Identities = 182/182 (100%)
Strand = Plus / Plus
Query: 1 atggatttgagggtctctaccgtaaatcagaaacttcttacttgcaaaatttacacggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atggatttgagggtctctaccgtaaatcagaaacttcttacttgcaaaatttacacggat 254
Query: 61 aaagaaggtcttcggcagcagcaattgttggctttcattcccagacatcataagcactac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaagaaggtcttcggcagcagcaattgttggctttcattcccagacatcataagcactac 314
Query: 121 attctgccaaattctgtcaataaaaaggtacatttcagtccacacatacagattgatgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attctgccaaattctgtcaataaaaaggtacatttcagtccacacatacagattgatgca 374
Query: 181 aa 182
||
Sbjct: 375 aa 376
>gnl|LJGI|TC64790 homologue to UniRef100_A7PZP6 Cluster: Chromosome chr15
scaffold_40, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 815
Score = 178 bits (90), Expect = 3e-44
Identities = 277/338 (81%), Gaps = 6/338 (1%)
Strand = Plus / Plus
Query: 103 agacatcataagcactacattctgccaaattctgtcaataaaaaggtacatttcagtcca 162
||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||
Sbjct: 1 agacatcataagcactacattttgccaaacgctgtcaataaaaaggtacatttcaatcca 60
Query: 163 cacatacaga---ttgatgcaaaacagaatccatttcaaaccagaactcgttttcaatct 219
|| ||| ||| ||||| ||| | | ||| ||||||||||||||||| || || ||||
Sbjct: 61 catataaagaagattgatacaagaaaaaattcatttcaaaccagaactggtcctctatct 120
Query: 220 tcaggtacccctgcatcaaaaactctttcatggcatttagcatcagagaccaagtctacc 279
||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 121 tcaggtacccctgttgcaaaaactctttcatggcatttagcatcagaaactaagtctacc 180
Query: 280 tt---gaaagggactttgcaggcttcgccaaacattgacaccccaaagtttactgccaag 336
|| ||| |||||||||| ||||| |||| | |||||| ||| | ||||||
Sbjct: 181 ttaaaaaaacggactttgcatgcttcaacaaagtccaaggacccaaaattttcggccaag 240
Query: 337 gcctctggagttttccaccttctagataatgaagagagaaccgggatgaaattctcacca 396
| ||||||||||||||||| ||||||||||||||| || ||||||| ||| |
Sbjct: 241 actactggagttttccaccttttagataatgaagagaatacgcagatgaaaccctctgcc 300
Query: 397 gcacaaactcacttgcagaatggagttcctacttctag 434
| ||||| |||||| | ||||||||||||||||||||
Sbjct: 301 ggacaaaatcacttaccaaatggagttcctacttctag 338
>gnl|LJGI|TC73329 similar to UniRef100_A7PZP6 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 542
Score = 135 bits (68), Expect = 4e-31
Identities = 98/108 (90%)
Strand = Plus / Plus
Query: 23 taaatcagaaacttcttacttgcaaaatttacacggataaagaaggtcttcggcagcagc 82
||||||||||||||||||| ||| || ||||||||||||||||||||||||||| ||||
Sbjct: 393 taaatcagaaacttcttacatgccgaacttacacggataaagaaggtcttcggcaacagc 452
Query: 83 aattgttggctttcattcccagacatcataagcactacattctgccaa 130
| |||||||||| ||||| ||||||||||||||||||||| ||||||
Sbjct: 453 agttgttggcttatattcctagacatcataagcactacattttgccaa 500