Miyakogusa Predicted Gene

Lj0g3v0153619.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0153619.1 Non Chatacterized Hit- tr|I1NFH0|I1NFH0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.6,0,FAMILY NOT
NAMED,NULL; coiled-coil,NULL; seg,NULL; ALMT,Aluminum-activated malate
transporter,gene.g11728.t1.1
         (1710 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72576 similar to UniRef100_A7PGR9 Cluster: Chromosome...    70   5e-11
gnl|LJGI|TC79672 similar to UniRef100_A7PGR9 Cluster: Chromosome...    58   2e-07

>gnl|LJGI|TC72576 similar to UniRef100_A7PGR9 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (29%)
          Length = 819

 Score = 69.9 bits (35), Expect = 5e-11
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                      
Query: 439 tgggccattctcactgttgttgttgtttttgaattcagcataggtgcaacccttagcaa 497
           ||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || |||||
Sbjct: 483 tgggctattctcactgttgttgttgtctttgaattcagtataggggcaactctcagcaa 541


>gnl|LJGI|TC79672 similar to UniRef100_A7PGR9 Cluster: Chromosome chr17 scaffold_16,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr17 scaffold_16, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (40%)
          Length = 887

 Score = 58.0 bits (29), Expect = 2e-07
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                        
Query: 1066 gtcatggcattgcatggatgcatactttcagaaatacaggctcctccggagaagaggctg 1125
            |||||||| ||||| |||||||||||||| ||||| ||||||||  | |||||||| || 
Sbjct: 488  gtcatggccttgcacggatgcatactttctgaaattcaggctccagctgagaagagactt 547

                 
Query: 1126 gtttt 1130
            |||||
Sbjct: 548  gtttt 552