Miyakogusa Predicted Gene
- Lj0g3v0152989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0152989.1 Non Chatacterized Hit- tr|I1NZ98|I1NZ98_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,53.93,2e-19,Dynein_light,Dynein light chain, type 1/2; DLC,Dynein
light chain, type 1/2; no description,Dynein l,CUFF.9450.1
(333 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024529 similar to UniRef100_A7P1E7 Cluster: Chromosom... 660 0.0
gnl|LJGI|GO009890 homologue to UniRef100_A7P1E7 Cluster: Chromos... 266 8e-71
>gnl|LJGI|GO024529 similar to UniRef100_A7P1E7 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 684
Score = 660 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Plus
Query: 1 atgctagaaggcaaggcagtgattggtgaaacagacatgcttcaaactatgcagcaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgctagaaggcaaggcagtgattggtgaaacagacatgcttcaaactatgcagcaaaac 161
Query: 61 gcgcttgatttagcatccaaagcacttgatttcttcgatgtcactgaagccattgagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gcgcttgatttagcatccaaagcacttgatttcttcgatgtcactgaagccattgagata 221
Query: 121 gccagatttataaagaaggaatttgataggatgcatggacctggttggcaatgtattgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccagatttataaagaaggaatttgataggatgcatggacctggttggcaatgtattgta 281
Query: 181 ggaactgattttggttcatttgtgacacattgctgtggctgcttcatctatttctgcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggaactgattttggttcatttgtgacacattgctgtggctgcttcatctatttctgcata 341
Query: 241 ggcagcttggccattttgctttttaggggctctgctgatcaagaagcaaaggaaaatcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggcagcttggccattttgctttttaggggctctgctgatcaagaagcaaaggaaaatcac 401
Query: 301 ttctcagcagcactagaggcagccagggcataa 333
|||||||||||||||||||||||||||||||||
Sbjct: 402 ttctcagcagcactagaggcagccagggcataa 434
>gnl|LJGI|GO009890 homologue to UniRef100_A7P1E7 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 531
Score = 266 bits (134), Expect = 8e-71
Identities = 242/277 (87%), Gaps = 2/277 (0%)
Strand = Plus / Plus
Query: 1 atgctagaaggcaaggcagtgattggtgaaacagacatgcttcaaactatgcagcaaaac 60
|||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| |
Sbjct: 87 atgctagaaggcaaagcagtgattggtgaaactgacatgctccaaaccatgcagcaggat 146
Query: 61 gcgcttgatttagcatccaaagcacttgatttcttcgatgtcactgaagccattgagata 120
|| || ||||||||||||||||||| |||| |||||||||||| ||||| |||||||||
Sbjct: 147 gctctgcatttagcatccaaagcactcgattccttcgatgtcaccgaagcaattgagata 206
Query: 121 gccagatttataaagaaggaatttgataggatgcatggacctggttggcaatgtattgta 180
||| |||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 207 gcccaatttatcaagaaggaatttgataggacgcatggacctggttggcaatgcattgta 266
Query: 181 ggaactgattttggttcatttgtgacacattgctgtggctgcttcatctatttctgcata 240
|| |||||||||||||||| ||||| || || | ||||||||| ||||| ||||||||
Sbjct: 267 ggtactgattttggttcatacgtgactcactgttatggctgctttatctacttctgcat- 325
Query: 241 ggcagcttggccattttgctttttaggggctctgctg 277
||| ||||||||||||||| || | ||| |||||||
Sbjct: 326 -gcaccttggccattttgctcttcaagggttctgctg 361