Miyakogusa Predicted Gene

Lj0g3v0152939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0152939.1 tr|D7KYY4|D7KYY4_ARALL ABC1 family protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476302
,61.67,0.00000000001,seg,NULL,CUFF.9451.1
         (186 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW599682 weakly similar to UniRef100_A7QRP0 Cluster: Ch...   369   e-102

>gnl|LJGI|BW599682 weakly similar to UniRef100_A7QRP0 Cluster: Chromosome undetermined
           scaffold_151, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_151,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (9%)
          Length = 481

 Score =  369 bits (186), Expect = e-102
 Identities = 186/186 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaggagctgtccatagcttcaaatcaaattggctccattcaagacattcttcctatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  atggaggagctgtccatagcttcaaatcaaattggctccattcaagacattcttcctatt 156

                                                                       
Query: 61  ctctctatcattcctgagctctcaccagaatcccagcagcaattgcttcaattaccagct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctctctatcattcctgagctctcaccagaatcccagcagcaattgcttcaattaccagct 216

                                                                       
Query: 121 aacttggttagccagttaatatctcgtgctgctgcaagaactatcaggagagtgtttttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 aacttggttagccagttaatatctcgtgctgctgcaagaactatcaggagagtgtttttg 276

                 
Query: 181 tgacat 186
           ||||||
Sbjct: 277 tgacat 282