Miyakogusa Predicted Gene
- Lj0g3v0152909.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0152909.1 Non Chatacterized Hit- tr|I3J255|I3J255_ORENI
Uncharacterized protein (Fragment) OS=Oreochromis
nilo,32.35,6e-19,LRR_6,NULL; RNI-like,NULL; Leucine-rich repeat - CC
(cysteine-containin,Leucine-rich repeat, cystein,CUFF.9456.1
(843 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60685 similar to UniRef100_O49286 Cluster: F-box/LRR-... 1086 0.0
gnl|LJGI|TC58397 similar to UniRef100_A7NSP3 Cluster: Chromosome... 924 0.0
gnl|LJGI|TC72919 weakly similar to UniRef100_A7NSP3 Cluster: Chr... 464 e-130
gnl|LJGI|FS316774 similar to UniRef100_Q8LDN3 Cluster: F-box pro... 424 e-118
>gnl|LJGI|TC60685 similar to UniRef100_O49286 Cluster: F-box/LRR-repeat protein 5;
n=1; Arabidopsis thaliana|Rep: F-box/LRR-repeat protein
5 - Arabidopsis thaliana (Mouse-ear cress), partial
(49%)
Length = 826
Score = 1086 bits (548), Expect = 0.0
Identities = 554/556 (99%)
Strand = Plus / Plus
Query: 288 tctgaatctctggggatgtgttcaagctgcatctgatactgcattgcaggctgttggaca 347
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tctgaatctctgtggatgtgttcaagctgcatctgatactgcattgcaggctgttggaca 64
Query: 348 atactgcaatcagttacagtctttgaaccttggatggtgtgataatgtttgtgatgttgg 407
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 65 atactgcaatcagttacagtctttgaaccttgggtggtgtgataatgtttgtgatgttgg 124
Query: 408 agtcatgagtttagcatatgggtgtcctgatcttagatcaattgacctgtgtggctgcat 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agtcatgagtttagcatatgggtgtcctgatcttagatcaattgacctgtgtggctgcat 184
Query: 468 tcgtataacagatgacagtgtgattgctttggcaaacaattgccctcacttgaggtctct 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tcgtataacagatgacagtgtgattgctttggcaaacaattgccctcacttgaggtctct 244
Query: 528 tggattgtattactgtcaaaacatcacagacagggcaatgtactgcttggcacagagcaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tggattgtattactgtcaaaacatcacagacagggcaatgtactgcttggcacagagcaa 304
Query: 588 agtgaataacaggatgtggggaaatgtgaaaggagcaaatgatgaggaaggcctaaggac 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agtgaataacaggatgtggggaaatgtgaaaggagcaaatgatgaggaaggcctaaggac 364
Query: 648 tttgaacattagccaatgcactgcactcacccctttagctgttcaagcagtctgtgactc 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tttgaacattagccaatgcactgcactcacccctttagctgttcaagcagtctgtgactc 424
Query: 708 attcccttctctccacacatgcccggtgagacactcacttatcatgagtggctgtctcag 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 attcccttctctccacacatgcccggtgagacactcacttatcatgagtggctgtctcag 484
Query: 768 tttgatgtctgtgcattgtgcttgcgccggccatgcgcatcgtgcaatcaccaatttccc 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tttgatgtctgtgcattgtgcttgcgccggccatgcgcatcgtgcaatcaccaatttccc 544
Query: 828 tcatcctgctcactga 843
||||||||||||||||
Sbjct: 545 tcatcctgctcactga 560
>gnl|LJGI|TC58397 similar to UniRef100_A7NSP3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 935
Score = 924 bits (466), Expect = 0.0
Identities = 491/498 (98%), Gaps = 1/498 (0%)
Strand = Plus / Plus
Query: 1 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 489
Query: 61 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 549
Query: 121 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 609
Query: 181 atagcccatggttgtggtgaccttataaaactaaacatcagtgggtgttcagcatttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 atagcccatggttgtggtgaccttataaaactaaacatcagtgggtgttcagcatttagc 669
Query: 241 gacaatgctttggcttaccttgctattttctgcagaagattaaaatttctgaatctctgg 300
||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 670 gacaatgctttggcttaccttgctagtttctgcagaagattaaaagttctgaatctctgt 729
Query: 301 ggatgtgttcaagctgcatctgatactgcattgcaggctgttggacaatactgcaatcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggatgtgttcaagctgcatctgatactgcattgcaggctgttggacaatactgcaatcag 789
Query: 361 ttacagtctttgaaccttggatggtgtgataatgtttgtgatgttggagtcatgagttta 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 790 ttacagtctctgaaccttggatggtgtgataatgtttgtgatgttggagtcatgaattta 849
Query: 421 gcatatgggtgtcctgatcttagatcaattgacctgtgtggctgcattcgtataacagat 480
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 850 gcatatgggtgtcctgatcttagatctattgacctgtgtggctgcattcgtataac-gat 908
Query: 481 gacagtgtgattgctttg 498
||||||||||||||||||
Sbjct: 909 gacagtgtgattgctttg 926
>gnl|LJGI|TC72919 weakly similar to UniRef100_A7NSP3 Cluster: Chromosome chr18
scaffold_1, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_1, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 655
Score = 464 bits (234), Expect = e-130
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 481
Query: 61 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 541
Query: 121 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 601
Query: 181 atagcccatggttgtggtgaccttataaaactaaacatcagtgggtgttcagca 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atagcccatggttgtggtgaccttataaaactaaacatcagtgggtgttcagca 655
>gnl|LJGI|FS316774 similar to UniRef100_Q8LDN3 Cluster: F-box protein AtFBL5; n=1;
Arabidopsis thaliana|Rep: F-box protein AtFBL5 -
Arabidopsis thaliana (Mouse-ear cress), partial (34%)
Length = 564
Score = 424 bits (214), Expect = e-118
Identities = 214/214 (100%)
Strand = Plus / Plus
Query: 1 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgaacaacttggtcctgtctcttgttcccaagttcaaaaaattggaaactctaatcctt 410
Query: 61 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cgtcaagacaaggctcaactggaggatagtactgttgagactattgcaaattgctgtaga 470
Query: 121 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gacctgcagatcctggacctcagcaaaagtttcaaacttacggatcgttcgctgtatgct 530
Query: 181 atagcccatggttgtggtgaccttataaaactaa 214
||||||||||||||||||||||||||||||||||
Sbjct: 531 atagcccatggttgtggtgaccttataaaactaa 564