Miyakogusa Predicted Gene

Lj0g3v0152879.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0152879.1 Non Chatacterized Hit- tr|I1MUI0|I1MUI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42205 PE,69.4,0,FAMILY
NOT NAMED,NULL; A_thal_3588: uncharacterized plant-specific
domain,Protein of unknown functio,CUFF.9443.1
         (802 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76331 similar to UniRef100_A7PGM0 Cluster: Chromosome...   111   7e-24

>gnl|LJGI|TC76331 similar to UniRef100_A7PGM0 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (55%)
          Length = 776

 Score =  111 bits (56), Expect = 7e-24
 Identities = 247/308 (80%), Gaps = 12/308 (3%)
 Strand = Plus / Plus

                                                                       
Query: 325 gggcatgtgcatttcgcgtttcaaaagcacccgacttcgcaaccagcttttctgatcgag 384
           ||||||||||||||||||||||| ||| |||| ||||||| ||| || ||||| ||||||
Sbjct: 472 gggcatgtgcatttcgcgtttcagaaggaccccacttcgccaccggcgtttctcatcgag 531

                                                                       
Query: 385 cttgcaaccccgatgagtggtttggttcgtgacatggcgtcgtctgggttggttagaatt 444
           || || || ||||| || ||||||||||| || ||||   | |||||||||||| |||||
Sbjct: 532 ctggcgacgccgataagcggtttggttcgagaaatgg---cttctgggttggttcgaatt 588

                                                                       
Query: 445 gctctagaatgtgacaaggagaa--agaagctg-cagagaagaaatc------caaagct 495
           ||||| || ||||| ||||||||   ||||  |  ||||||| || |       || | |
Sbjct: 589 gctctggagtgtgataaggagaaggggaaggagaaagagaaggaagcagagaagaagggt 648

                                                                       
Query: 496 ctgaggttgctggaagagcctctgtggaggacattctgcaatggcaagaagtgtggtttt 555
            ||||||||||| | ||||||||||||||||| | ||| ||||| ||||||||||| |||
Sbjct: 649 gtgaggttgctgcaggagcctctgtggaggacttactgtaatgggaagaagtgtgggttt 708

                                                                       
Query: 556 gctgccacaagagaatgtgggcctagggagtgggatatcctcaaagcggtggagccaatt 615
           ||| |||  |||||||| ||    | ||| ||||| || || ||||||||||||||||||
Sbjct: 709 gctaccaggagagaatgcggtgagaaggactgggagattctgaaagcggtggagccaatt 768

                   
Query: 616 tcaatggg 623
           ||||||||
Sbjct: 769 tcaatggg 776