Miyakogusa Predicted Gene

Lj0g3v0151999.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0151999.1 tr|C1MWA8|C1MWA8_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_1862,36.47,3e-17,seg,NULL; DnaJ,Heat shock protein
DnaJ, N-terminal; zf-CSL,Zinc finger, DPH-type; DnaJ molecular
cha,CUFF.9369.1
         (566 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW596549 weakly similar to UniRef100_Q0J522 Cluster: Os...   504   e-142

>gnl|LJGI|BW596549 weakly similar to UniRef100_Q0J522 Cluster: Os08g0474600 protein;
           n=2; Oryza sativa|Rep: Os08g0474600 protein - Oryza
           sativa subsp. japonica (Rice), partial (20%)
          Length = 482

 Score =  504 bits (254), Expect = e-142
 Identities = 257/258 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcaacatccaaaaatgcttctatacaaggataacattcatgaaactcattatgaggtc 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 225 atgcaacatccaaaaatgcttctatacaaggataacattcaggaaactcattatgaggtc 284

                                                                       
Query: 61  ctcaatgtcaaggaagacgcggactatgaagaaattcgtgccagttacagaactgccatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ctcaatgtcaaggaagacgcggactatgaagaaattcgtgccagttacagaactgccatc 344

                                                                       
Query: 121 ctcagtttccatcctgataaactattgaagtcacctgagacatcatccagcaatgatcta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ctcagtttccatcctgataaactattgaagtcacctgagacatcatccagcaatgatcta 404

                                                                       
Query: 181 ccaactggagagagatttctcaaagtgcaaaaggcatgggaaattctaagcaattcgagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccaactggagagagatttctcaaagtgcaaaaggcatgggaaattctaagcaattcgagc 464

                             
Query: 241 tctcgctcatcttatgat 258
           ||||||||||||||||||
Sbjct: 465 tctcgctcatcttatgat 482