Miyakogusa Predicted Gene

Lj0g3v0151909.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0151909.1 Non Chatacterized Hit- tr|D3A4Q2|D3A4Q2_NEISU
Putative lipooligosaccharide biosynthesis glycosyltran,42.42,4.1,
,CUFF.9358.1
         (166 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77588 UniRef100_Q6J9H4 Cluster: SET binding protein 1...   329   3e-90

>gnl|LJGI|TC77588 UniRef100_Q6J9H4 Cluster: SET binding protein 1; n=1; Gorilla
           gorilla|Rep: SET binding protein 1 - Gorilla gorilla
           (gorilla), partial (5%)
          Length = 1022

 Score =  329 bits (166), Expect = 3e-90
 Identities = 166/166 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgctaataataaccaataggacatctccttcaataataaacctggtaattccacttttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 atgctaataataaccaataggacatctccttcaataataaacctggtaattccacttttg 655

                                                                       
Query: 61  cagcaccaggattcctcaagaccttcaaaccagcggctccatcaactactagttctccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 cagcaccaggattcctcaagaccttcaaaccagcggctccatcaactactagttctccca 595

                                                         
Query: 121 cagcaattaaaactgtctcaaattcatgccatttcaaaggcttaat 166
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 cagcaattaaaactgtctcaaattcatgccatttcaaaggcttaat 549