Miyakogusa Predicted Gene
- Lj0g3v0151829.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0151829.1 tr|I1CPV8|I1CPV8_RHIO9 SSU rRNA processing
protein OS=Rhizopus delemar (strain RA 99-880 / ATCC
MYA-,41.73,3e-18,RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED,Ribosomal
RNA-processing protein 7; coiled-coil,NULL; seg,CUFF.9359.1
(879 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72093 similar to UniRef100_Q9FKR4 Cluster: Emb|CAB415... 918 0.0
>gnl|LJGI|TC72093 similar to UniRef100_Q9FKR4 Cluster: Emb|CAB41546.1|; n=1;
Arabidopsis thaliana|Rep: Emb|CAB41546.1| - Arabidopsis
thaliana (Mouse-ear cress), partial (39%)
Length = 1351
Score = 918 bits (463), Expect = 0.0
Identities = 463/463 (100%)
Strand = Plus / Plus
Query: 417 gcatcatcaagatgaagttcatattatttcttctggggatgaagactgctcaaaaggaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcatcatcaagatgaagttcatattatttcttctggggatgaagactgctcaaaaggaat 628
Query: 477 gaaaaaatggatcatggaataccatcaaagtagaccagggttggaaacattgcaacgtca 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaaaaaatggatcatggaataccatcaaagtagaccagggttggaaacattgcaacgtca 688
Query: 537 aattgatgactttataactgctcatgaggaaaaacttgaggaggaaagaaaagaaaaaga 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aattgatgactttataactgctcatgaggaaaaacttgaggaggaaagaaaagaaaaaga 748
Query: 597 agcccttgctgcagatgggggatggacggttgttgtgcaccataagggtagaaagaaaac 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 agcccttgctgcagatgggggatggacggttgttgtgcaccataagggtagaaagaaaac 808
Query: 657 tactgaatctgaaagtggaattgctgtgggctcggttgctcaagctgctgtggagaataa 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tactgaatctgaaagtggaattgctgtgggctcggttgctcaagctgctgtggagaataa 868
Query: 717 aatgtccaaaaagaagcctaaagaagttggtttagatttctaccgcttccagaaaaaaga 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 aatgtccaaaaagaagcctaaagaagttggtttagatttctaccgcttccagaaaaaaga 928
Query: 777 agcccatagaaatgagctcatggagttgcagagcaaatttgaggaggataaaaaacatct 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 agcccatagaaatgagctcatggagttgcagagcaaatttgaggaggataaaaaacatct 988
Query: 837 tcagcagttgagagcttccaggaaatttagaccttattagaca 879
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 tcagcagttgagagcttccaggaaatttagaccttattagaca 1031
Score = 577 bits (291), Expect = e-164
Identities = 291/291 (100%)
Strand = Plus / Plus
Query: 66 cagggaacaaaatgctgatgttgaacttgaaacacatgttacattgaacactcaagagga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cagggaacaaaatgctgatgttgaacttgaaacacatgttacattgaacactcaagagga 277
Query: 126 tcgtggaatgcgcgatagaaaagcaaataaggacaaagcttctaccaacagaaaaagaaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcgtggaatgcgcgatagaaaagcaaataaggacaaagcttctaccaacagaaaaagaaa 337
Query: 186 gaacaaggagaaaagtcgagttgaaagacaaatgccagtgggtgaagaagttgatttggt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaacaaggagaaaagtcgagttgaaagacaaatgccagtgggtgaagaagttgatttggt 397
Query: 246 agagaaaaatgatggaatattggacaactgtcattctaaatacgaggagatcaaggactc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 agagaaaaatgatggaatattggacaactgtcattctaaatacgaggagatcaaggactc 457
Query: 306 tatggagcatggagactcggatattggagcatctgttgaaccctgtaggtc 356
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tatggagcatggagactcggatattggagcatctgttgaaccctgtaggtc 508