Miyakogusa Predicted Gene

Lj0g3v0151489.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0151489.1 tr|B9GVV8|B9GVV8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_554914 PE=4
SV=1,53.16,0.00000000007,Tub,Tubby, C-terminal; no description,Tubby,
C-terminal; seg,NULL; Tubby C-terminal domain-like,Tubb,CUFF.9317.1
         (1029 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI419957 similar to UniRef100_A7PVJ1 Cluster: Chromosom...   769   0.0  

>gnl|LJGI|BI419957 similar to UniRef100_A7PVJ1 Cluster: Chromosome chr9 scaffold_33,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_33, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 558

 Score =  769 bits (388), Expect = 0.0
 Identities = 391/392 (99%)
 Strand = Plus / Plus

                                                                       
Query: 597 ccttgggacggtaactgctaacctcatgggctcaaaatactgcatttgggatcagggaca 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ccttgggacggtaactgctaacctcatgggctcaaaatactgcatttgggatcagggaca 60

                                                                       
Query: 657 tcgtcaccgttctcatagtaaacaaccaaagctacctctttctgttgtgaggtatatacc 716
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcgtcaccgttctcatagtaaacaaccaaagctacctctttctgttgtgaggtatatacc 120

                                                                       
Query: 717 tacaatagcaacatgcactggaagtcacagaagcatgagagcatatataccaaagcatca 776
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaatagcaacatgcactggaagtcacagaagcatgagagcatatataccaaagcatca 180

                                                                       
Query: 777 atctatgtcactgaagaacaccacccaggcacaacatattaaaggattgccaatgaattg 836
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atctatgtcactgaagaacaccacccaggcacaacatattaaaggattgccaatgaattg 240

                                                                       
Query: 837 ggaggggaaattggacaaagtccatcaactattcacaagggttccactgtacaacaagat 896
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggggaaattggacaaagtccatcaactattcacaagggttccactgtacaacaagat 300

                                                                       
Query: 897 ttcgaaacaacttgagcttgattatagagataaaggaaggccagaacttagaattcaaag 956
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcaaaacaacttgagcttgattatagagataaaggaaggccagaacttagaattcaaag 360

                                           
Query: 957 atccgcgaaaaactttcagctgaccctagagg 988
           ||||||||||||||||||||||||||||||||
Sbjct: 361 atccgcgaaaaactttcagctgaccctagagg 392