Miyakogusa Predicted Gene

Lj0g3v0151219.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0151219.1 Non Chatacterized Hit- tr|B7FLF9|B7FLF9_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,69.88,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PMR5N,PMR5 N-terminal domain; PC-Esterase,CUFF.9322.1
         (498 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77375 similar to UniRef100_A7PAJ7 Cluster: Chromosome...   214   4e-55
gnl|LJGI|TC61597 similar to UniRef100_A7PAJ7 Cluster: Chromosome...   198   2e-50

>gnl|LJGI|TC77375 similar to UniRef100_A7PAJ7 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (68%)
          Length = 1393

 Score =  214 bits (108), Expect = 4e-55
 Identities = 225/264 (85%)
 Strand = Plus / Plus

                                                                       
Query: 235 tgtgacattttcaagggtgaatggattccaaatcctaatgcaccatattacacaaacaga 294
           |||||||||||||| || |||||| | ||| |||| || ||||||||||||||||||| |
Sbjct: 202 tgtgacattttcaatggggaatgggtgccagatccaaaggcaccatattacacaaacaaa 261

                                                                       
Query: 295 acatgcagggtaattcatgagcaccaaaattgcatgaagtatggtagacctgacactgag 354
           |||||| ||| ||||||||||||||| |||||||||||||||||||| |||||| | |||
Sbjct: 262 acatgctgggcaattcatgagcaccagaattgcatgaagtatggtaggcctgactcagag 321

                                                                       
Query: 355 ttcatgaaatggaggtggaagccaagtgcttgtgaactccccatattcaatcccttccag 414
           ||||||||||||||||||||||||| ||  ||||| || ||  | ||||| || ||||||
Sbjct: 322 ttcatgaaatggaggtggaagccaaatgagtgtgagctaccacttttcaaccctttccag 381

                                                                       
Query: 415 ttcctagaaattgtgagggggaaatcaatggcctttgtaggagactctgtaggcaggaat 474
           || || ||| |||||| ||| ||||||||||| ||||| ||||| || ||  ||||||| 
Sbjct: 382 tttcttgaagttgtgaagggaaaatcaatggcatttgttggagattcagttcgcaggaac 441

                                   
Query: 475 catatgcaatccatgatttgcctc 498
           || ||||| || ||||||||||||
Sbjct: 442 cagatgcagtctatgatttgcctc 465


>gnl|LJGI|TC61597 similar to UniRef100_A7PAJ7 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (70%)
          Length = 1568

 Score =  198 bits (100), Expect = 2e-50
 Identities = 223/264 (84%)
 Strand = Plus / Plus

                                                                       
Query: 235 tgtgacattttcaagggtgaatggattccaaatcctaatgcaccatattacacaaacaga 294
           |||||||||||||  ||||| ||| ||||||| || || || || |||||||||||||  
Sbjct: 327 tgtgacattttcactggtgagtgggttccaaacccaaaggctccttattacacaaacaag 386

                                                                       
Query: 295 acatgcagggtaattcatgagcaccaaaattgcatgaagtatggtagacctgacactgag 354
           |||||| ||| ||||||||||||||| ||||||||||||||||| || || ||| |||||
Sbjct: 387 acatgctgggcaattcatgagcaccagaattgcatgaagtatgggaggccagactctgag 446

                                                                       
Query: 355 ttcatgaaatggaggtggaagccaagtgcttgtgaactccccatattcaatcccttccag 414
           ||||||||||||||||||||||||| ||  ||||| || ||||| ||||| || || |||
Sbjct: 447 ttcatgaaatggaggtggaagccaaatgggtgtgagcttcccattttcaacccttttcag 506

                                                                       
Query: 415 ttcctagaaattgtgagggggaaatcaatggcctttgtaggagactctgtaggcaggaat 474
           ||  | || |||||||||||||||||  |||| ||||| ||||| || || || ||||||
Sbjct: 507 tttttggagattgtgagggggaaatctttggcttttgttggagattcagttgggaggaat 566

                                   
Query: 475 catatgcaatccatgatttgcctc 498
           || ||||| |||||||||||||||
Sbjct: 567 cagatgcagtccatgatttgcctc 590