Miyakogusa Predicted Gene

Lj0g3v0151119.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0151119.1 Non Chatacterized Hit- tr|I1K2I7|I1K2I7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42423
PE,62.93,0,HLH,Helix-loop-helix domain; no
description,Helix-loop-helix domain; coiled-coil,NULL; seg,NULL;
HLH,CUFF.9291.1
         (969 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chr...   103   2e-21

>gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chromosome chr7
           scaffold_572, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_572, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (71%)
          Length = 1601

 Score =  103 bits (52), Expect = 2e-21
 Identities = 145/176 (82%)
 Strand = Plus / Plus

                                                                       
Query: 457 gatcacatcatggcagagagaaagcgcagggagaagctcagccagagcttcattgctctc 516
           ||||||||||| || ||||||| ||| || |||||||||||||||||||| |||||||| 
Sbjct: 620 gatcacatcatagctgagagaaggcgtagagagaagctcagccagagcttaattgctctt 679

                                                                       
Query: 517 gcagcacttgttcctggccttaagaagatggacaagtcctctgtattaacagacgcaatc 576
           ||||| ||| |||||||  | ||||||||||||||| | || ||  |   |||||| |||
Sbjct: 680 gcagcccttattcctggtttaaagaagatggacaaggcttcagtccttggagacgctatc 739

                                                                   
Query: 577 aaatatgtgaaagagctaaaggagcgtttggcggtgctggaagaacagagcaagaa 632
           || || ||||||| ||| || |||||||||  | | ||||||||||||| ||||||
Sbjct: 740 aagtacgtgaaagtgcttaaagagcgtttgaggttactggaagaacagaacaagaa 795