Miyakogusa Predicted Gene

Lj0g3v0150519.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0150519.1 Non Chatacterized Hit- tr|C3Z6K4|C3Z6K4_BRAFL
Putative uncharacterized protein OS=Branchiostoma flor,38.33,0.043,
,CUFF.9236.1
         (250 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58365                                                      496   e-140

>gnl|LJGI|TC58365 
          Length = 841

 Score =  496 bits (250), Expect = e-140
 Identities = 250/250 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagtttaattaaatgtcatattctattttctgcactgtcttcagtttgtatagaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atgagtttaattaaatgtcatattctattttctgcactgtcttcagtttgtatagaagct 344

                                                                       
Query: 61  ggattagtggtgtgggctgtggatttttgcaggcgagtattctgcttggctggtgaaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ggattagtggtgtgggctgtggatttttgcaggcgagtattctgcttggctggtgaaatt 404

                                                                       
Query: 121 tggaaaccattaaggaccgagttggcagatttgatgaagatagctaattgtttgtgttgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tggaaaccattaaggaccgagttggcagatttgatgaagatagctaattgtttgtgttgt 464

                                                                       
Query: 181 ctcgtggctaatgatattggatgttggaggattttggaactatctgttttggttttgaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctcgtggctaatgatattggatgttggaggattttggaactatctgttttggttttgaca 524

                     
Query: 241 gataaataaa 250
           ||||||||||
Sbjct: 525 gataaataaa 534