Miyakogusa Predicted Gene
- Lj0g3v0150479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0150479.1 tr|C7IZM4|C7IZM4_ORYSJ Os03g0632800 protein
OS=Oryza sativa subsp. japonica GN=Os03g0632800 PE=4
SV=,65.71,6e-18,no description,Zinc finger, RING/FYVE/PHD-type;
seg,NULL; RING FINGER PROTEIN,NULL; RING/U-box,NULL;,CUFF.9242.1
(1284 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chr... 2442 0.0
gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome... 161 1e-38
gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosom... 129 5e-29
gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosom... 101 1e-20
>gnl|LJGI|TC63288 weakly similar to UniRef100_A7QVP5 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (63%)
Length = 1636
Score = 2442 bits (1232), Expect = 0.0
Identities = 1267/1284 (98%)
Strand = Plus / Plus
Query: 1 atgtcgaatgcgaagaagaagaagatgatgatggtggccaaagtcgagaggcaaacgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 atgtcgaatgcgaagaagaagaagatgatgatggtggccaaagtcgagaggcaaacgctt 234
Query: 61 gaagcatgcatgaaatgccctctttgctataagattttcagagaagctaccaccatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 gaagcatgcatgaaatgccctctttgctataagattttcagagaagctaccaccatttct 294
Query: 121 ctctgccttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctctgccttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatg 354
Query: 181 gattgctgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gattgctgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcct 414
Query: 241 gaccacaatttgcaagatatgagggccaaattattcccttttaagcnnnnnnngataaga 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 415 gaccacaatttgcaagatatgagggccaaattattcccttttaagcaaaaaaagataaga 474
Query: 301 cctcaagaagttgttccttctgtatccccaccagcgaaaaggaaggaaagatcactttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cctcaagaagttgttccttctgtatccccaccagcgaaaaggaaggaaagatcactttca 534
Query: 361 tcactggtggttagtgctcccaaagtttcgacaaacactggctttacaggaaagagaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tcactggtggttagtgctcccaaagtttcgacaaacactggctttacaggaaagagaact 594
Query: 421 aaaaccagtacaagaaaggctgctactttacgtggatgcaattttaaccttgaagaatcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aaaaccagtacaagaaaggctgctactttacgtggatgcaattttaaccttgaagaatcc 654
Query: 481 ataaagactgaaggaaaacatggtgaacataatttggttccttccacagctgagccttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ataaagactgaaggaaaacatggtgaacataatttggttccttccacagctgagccttct 714
Query: 541 aagaagcataggcccaatgaagatacaaagaacagtatggaccttacagaagagaaggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aagaagcataggcccaatgaagatacaaagaacagtatggaccttacagaagagaaggtt 774
Query: 601 gatctctggacacccttgcactgtcttcttgaagtagccaatagaacaaagttctccaag 660
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 775 gatctctggacacccttgcactgtcttcttgaagtagccaatagaacaaatttctccaag 834
Query: 661 tcaaattcacaagggactcctcatgccaaattagaaggtaatctagctactcctcaaggt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tcaaattcacaagggactcctcatgccaaattagaaggtaatctagctactcctcaaggt 894
Query: 721 ggacaaaagaagtctgaaactacaaccaaatcagagacacttgcttctgtccagagtgcc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 ggacaaaagaagtctgaaactacaaccaaatcagagacacttgcttctgtccagagtgcc 954
Query: 781 aaaaccaaggataatgggcacaaagcaaagcttggagatgataaggatggaaaaaccttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 aaaaccaaggataatgggcacaaagcaaagcttggagatgataaggatggaaaaaccttt 1014
Query: 841 ccttcaggaccaaggaagcgaagaagggtgcgtcctgatagtcagnnnnnnnnngcagca 900
||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1015 ccttcaggaccaaggaagcgaagaagggtgcgtcctgatagtcagaaaaaaaaagcagca 1074
Query: 901 tccaagatcatgttagatgcaacagagagcagatgcaacggggaaaacagtgctatttgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 tccaagatcatgttagatgcaacagagagcagatgcaacggggaaaacagtgctatttgg 1134
Query: 961 ttttcattagttgcttcagaagaccagaaaggagaatttcccttgcctcagatttcagca 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 ttttcattagttgcttcagaagaccagaaaggagaatttcccttgcctcagatttcagca 1194
Query: 1021 tgttatttaagaataaaggatggtaatgttcccgtctcatttattcataagtatcttgcg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 tgttatttaagaataaaggatggtaatgttcccgtctcatttattcataagtatcttgcg 1254
Query: 1081 aagaaacttaatcttgccagcgaagcagaggttgtgataacatgtaggggccagtccttg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1255 aagaaacttaatcttgccagcgaagcagaggttgtgataacatgtaggggccagtccttg 1314
Query: 1141 ctcccatctttgaaactgcataacatagtagatttgtggttgtgtacaacaccatcctca 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 ctcccatctttgaaactgcataacatagtagatttgtggttgtgtacaacaccatcctca 1374
Query: 1201 aaaaagataagggcgtctgtgggatcctcggctaaggagtttgtgatggttttgtcatat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 aaaaagataagggcgtctgtgggatcctcggctaaggagtttgtgatggttttgtcatat 1434
Query: 1261 tctcgaaatcccttacctctgtga 1284
||||||||||||||||||||||||
Sbjct: 1435 tctcgaaatcccttacctctgtga 1458
>gnl|LJGI|TC62720 similar to UniRef100_A7QVP5 Cluster: Chromosome chr14 scaffold_190,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_190, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1018
Score = 161 bits (81), Expect = 1e-38
Identities = 165/193 (85%)
Strand = Plus / Plus
Query: 65 catgcatgaaatgccctctttgctataagattttcagagaagctaccaccatttctctct 124
||||||||| ||||||||||||| ||| | |||| || ||||||||||| |||||||
Sbjct: 316 catgcatgacatgccctctttgccgtaaactcttcaaggatgctaccaccatctctctct 375
Query: 125 gccttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatggatt 184
||||||| |||||||||||||| ||||| |||||||| || |||||||||||| ||||
Sbjct: 376 gccttcataccttttgcaggaaatgcatttatgagaagctctcagatgaggagtctgatt 435
Query: 185 gctgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcctgacc 244
|||||||||| |||||||||||||| || || | |||||||||| |||||| | ||||
Sbjct: 436 gctgtccagtgtgcaatattgatctaggatgtgttccagtggaaaaactcagggcagacc 495
Query: 245 acaatttgcaaga 257
|||||||||||||
Sbjct: 496 acaatttgcaaga 508
Score = 145 bits (73), Expect = 8e-34
Identities = 271/337 (80%)
Strand = Plus / Plus
Query: 337 aaaaggaaggaaagatcactttcatcactggtggttagtgctcccaaagtttcgacaaac 396
|||||||| |||||||||||||| ||| ||| ||||| ||||||||||||||| | |
Sbjct: 588 aaaaggaaagaaagatcactttcgtcattggcggttattgctcccaaagtttcaatgcaa 647
Query: 397 actggctttacaggaaagagaactaaaaccagtacaagaaaggctgctactttacgtgga 456
|||||||| ||||||||| | || |||||||||| ||||| ||||| | |||||||||
Sbjct: 648 actggcttcacaggaaagcggacaaaaaccagtaacagaaaagctgcctcattacgtgga 707
Query: 457 tgcaattttaaccttgaagaatccataaagactgaaggaaaacatggtgaacataatttg 516
|| | ||||| |||||||| || |||||| |||| || | || |||| ||||| |
Sbjct: 708 tgtagttttattcttgaagaccccgtaaagaaggaagaaacaaataatgaagataataag 767
Query: 517 gttccttccacagctgagccttctaagaagcataggcccaatgaagatacaaagaacagt 576
| | |||||| |||| || | ||||||||||| |||||||||||| | ||||||||
Sbjct: 768 gattcttccaaggctgggcaatttaagaagcataagcccaatgaagacatggagaacagt 827
Query: 577 atggaccttacagaagagaaggttgatctctggacacccttgcactgtcttcttgaagta 636
|||| ||| |||||| ||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 828 gtggaacttgcagaagggaaggttgatctctggacaccattgaactgtcttgttgaagct 887
Query: 637 gccaatagaacaaagttctccaagtcaaattcacaag 673
|| || ||||| |||| || |||| | ||||||||||
Sbjct: 888 gcaaacagaacgaagtccttcaaggccaattcacaag 924
>gnl|LJGI|FS347780 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 635
Score = 129 bits (65), Expect = 5e-29
Identities = 143/169 (84%)
Strand = Plus / Minus
Query: 944 aaaacagtgctatttggttttcattagttgcttcagaagaccagaaaggagaatttccct 1003
|||||||| |||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct: 468 aaaacagtcctatttggttttcattagttgcttcagaggatcagaaaggagatgcctcct 409
Query: 1004 tgcctcagatttcagcatgttatttaagaataaaggatggtaatgttcccgtctcattta 1063
|||| ||||| ||| | ||||| |||||||||| ||||||| || |||||||||||||
Sbjct: 408 tgccacagatctcatcttgttacttaagaataagagatggtaccgtgcccgtctcattta 349
Query: 1064 ttcataagtatcttgcgaagaaacttaatcttgccagcgaagcagaggt 1112
| || || || |||| ||||||||| ||||||||||| ||| |||||||
Sbjct: 348 tacaaaaataccttgtgaagaaactcaatcttgccagtgaaacagaggt 300
>gnl|LJGI|DC594315 similar to UniRef100_A7PUM6 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 589
Score = 101 bits (51), Expect = 1e-20
Identities = 114/135 (84%)
Strand = Plus / Plus
Query: 127 cttcacaccttttgcaggaagtgcatatatgagaaactttcagatgaggagatggattgc 186
|||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||| |||
Sbjct: 455 cttcacacgttttgcaggaagtgcatttatgataaactttcagatgaggaattggaatgc 514
Query: 187 tgtccagtatgcaatattgatctggggtgcatggcagtggaaaagctcaggcctgaccac 246
|||||| | ||||| |||||| |||| || | || | || || || ||||| ||||||
Sbjct: 515 tgtccaatttgcaacattgatttgggctgtgttccacttgagaaactgaggccagaccac 574
Query: 247 aatttgcaagatatg 261
|||||||||||||||
Sbjct: 575 aatttgcaagatatg 589