Miyakogusa Predicted Gene

Lj0g3v0150029.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0150029.1 Non Chatacterized Hit- tr|G1SGU7|G1SGU7_RABIT
Uncharacterized protein (Fragment) OS=Oryctolagus
cuni,33.85,3.6,seg,NULL,CUFF.9194.1
         (633 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63133 similar to UniRef100_A7Q8X9 Cluster: Chromosome...   147   1e-34

>gnl|LJGI|TC63133 similar to UniRef100_A7Q8X9 Cluster: Chromosome chr9 scaffold_65,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_65, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 839

 Score =  147 bits (74), Expect = 1e-34
 Identities = 284/354 (80%)
 Strand = Plus / Minus

                                                                       
Query: 132 cacagcaagcttgaagctttcccatgttggtgaagaattgcagcgttcccaccactggaa 191
           |||||| | ||||||||||||||| |  || ||||  ||||||||||||||||| |||||
Sbjct: 706 cacagctaacttgaagctttcccacgaaggagaagggttgcagcgttcccaccattggaa 647

                                                                       
Query: 192 caagctgagaacacgaccttctaaggcaaccacggtagcttgcatcctttcatcctctga 251
           | | |||||  | |  ||||| |  || || |  || ||||||||| | || ||||||||
Sbjct: 646 ccaactgagtgcccttccttcaagagccacgagtgtcgcttgcatcttctcttcctctga 587

                                                                       
Query: 252 aacttctctcagtgaaaaatacctctcgagcctttgtgtccaaccgagagcatcgtctcc 311
           ||| || ||||  | ||| |||||||| |  || || |||||||||| |||||| || ||
Sbjct: 586 aacctccctcaacgcaaagtacctctccaatctctgagtccaaccgaaagcatcatcccc 527

                                                                       
Query: 312 tgagaagattgaaatttccaatttcctccatcgattcttggtcggaattctctggcgaat 371
           ||||||||||| ||||||||  |||||||| ||||||||| |||||| |   ||||||| 
Sbjct: 526 tgagaagattggaatttccagcttcctccaccgattcttgatcggaagttgatggcgaaa 467

                                                                       
Query: 372 ctcacgatcccttccaatctcgctaccttcttcatctgaaagttcccttctccaatcacc 431
           ||| |||||||||||| | |||||  | || ||||| ||||| || | ||||| ||| ||
Sbjct: 466 ctcgcgatcccttccactatcgctggcgtcctcatcggaaagctctcgtctccgatctcc 407

                                                                 
Query: 432 caacctggctttgagtgcagcgatgagatcctctgccttcttcgttcgagcttc 485
            | |||||||| |||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 406 gaccctggcttcgagtgcggcgatgagatcctcagccttcttcgtacgagcttc 353