Miyakogusa Predicted Gene
- Lj0g3v0149999.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0149999.3 tr|F2CUH7|F2CUH7_HORVD DNA-directed RNA
polymerase OS=Hordeum vulgare var. distichum PE=2
SV=1,27.01,1e-17,beta and beta-prime subunits of DNA dependent
RNA-polymerase,NULL; DNA-DIRECTED RNA POLYMERASE,NULL;,CUFF.9209.3
(1263 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79448 similar to UniRef100_A5BZZ3 Cluster: DNA-direct... 1227 0.0
>gnl|LJGI|TC79448 similar to UniRef100_A5BZZ3 Cluster: DNA-directed RNA polymerase;
n=1; Vitis vinifera|Rep: DNA-directed RNA polymerase -
Vitis vinifera (Grape), partial (21%)
Length = 1165
Score = 1227 bits (619), Expect = 0.0
Identities = 619/619 (100%)
Strand = Plus / Plus
Query: 645 tgttgatcctgactttattgagaaatatgttccaagaaagagtttgcttgatctcaatta 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttgatcctgactttattgagaaatatgttccaagaaagagtttgcttgatctcaatta 60
Query: 705 cttccctgtgacaccaaatggtcatcgtgtgacagagttctctcatcgaccttccaatgg 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cttccctgtgacaccaaatggtcatcgtgtgacagagttctctcatcgaccttccaatgg 120
Query: 765 accgaaattgagttttgatgacaggaccagggcttgcaagaaattggttgatttcagagg 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accgaaattgagttttgatgacaggaccagggcttgcaagaaattggttgatttcagagg 180
Query: 825 tccagccgttgagttaagctctcatgtcatcaattccctaagtctctctaagctaaatcc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccagccgttgagttaagctctcatgtcatcaattccctaagtctctctaagctaaatcc 240
Query: 885 tgacaaaacaccaagtaatatgtttactgaactccagcaaagaaaggttggagaaaatgc 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgacaaaacaccaagtaatatgtttactgaactccagcaaagaaaggttggagaaaatgc 300
Query: 945 ttgcaactcttctggtttaagatggatgaaagatgttgttctgggaaaacgcaatgattg 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgcaactcttctggtttaagatggatgaaagatgttgttctgggaaaacgcaatgattg 360
Query: 1005 ttcattccgcactgtagttgttggtgatccagaccttgcactcagtgaaattggtgtacc 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcattccgcactgtagttgttggtgatccagaccttgcactcagtgaaattggtgtacc 420
Query: 1065 ttgtcaaattgcagaaagtttgcaagtttctgtgtatgtgaacagggagaataagaaaaa 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgtcaaattgcagaaagtttgcaagtttctgtgtatgtgaacagggagaataagaaaaa 480
Query: 1125 tttgcttgactgttgtgagctacgcctgttagagaagggacattttaaagtttgcagaaa 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgcttgactgttgtgagctacgcctgttagagaagggacattttaaagtttgcagaaa 540
Query: 1185 gggcaggccagttgtattgtataaaaagaaagatctacagattggagacttactttatag 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gggcaggccagttgtattgtataaaaagaaagatctacagattggagacttactttatag 600
Query: 1245 gcctcttaccgatggggat 1263
|||||||||||||||||||
Sbjct: 601 gcctcttaccgatggggat 619