Miyakogusa Predicted Gene

Lj0g3v0149189.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0149189.1 Non Chatacterized Hit- tr|D6WB97|D6WB97_TRICA
Putative uncharacterized protein OS=Tribolium castaneu,46.73,3e-19,no
description,Peptidyl-tRNA hydrolase II domain; PTH2,Peptidyl-tRNA
hydrolase, PTH2; UNKNOWN PROTEI,CUFF.9140.1
         (585 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75184 similar to UniRef100_A7P4X3 Cluster: Chromosome...  1011   0.0  

>gnl|LJGI|TC75184 similar to UniRef100_A7P4X3 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (85%)
          Length = 636

 Score = 1011 bits (510), Expect = 0.0
 Identities = 531/538 (98%)
 Strand = Plus / Plus

                                                                       
Query: 26  catcgattcgtttcttcactccctccagttcgtacctctcttccagagttagggttacac 85
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   catcgattcgtttcttcactccctccagttcgtacctctcttccagagttagggttacac 60

                                                                       
Query: 86  tagcacattttcacgcagcttctgtctcgtaccgggcgagtggactcacctctagctcaa 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tagcacattttcacgcagcttctgtctcgtaccgggcgagtggactcacctctagctcaa 120

                                                                       
Query: 146 tgagtcaacccgccgattccgacactctttcgactccgattgaagcaccgtcgaagccgg 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgagtcaacccgccgattccgacactctttcgactccgattgaagcaccgtcgaagccgg 180

                                                                       
Query: 206 aaaacgccgatgttttggtccagtacgtggtgctccggcgagacctgatcgacacttggc 265
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaacgccgatgttttggtcccgtacgtggtgctccggcgagacctgatcgacacttggc 240

                                                                       
Query: 266 cgctgggtagcgttgttactcaaggctgccacgcttctgtttccgccatttggtctagca 325
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 241 cgctgggtagcgttgttactcaaggctgccacgcttctgtttccgccctttggtctagcc 300

                                                                       
Query: 326 aagacgatcctctcaccgtcgattattgcagccctgataaaattgattctatgcacaaag 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagacgatcctctcaccgtcgattattgcagccctgataaaattgattctatgcacaaag 360

                                                                       
Query: 386 tcacacttgaagtgaagggagagccccaaataaaaaacttgtctgagaagcttacatctg 445
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 361 tcacacttgaagtgaagggagagcccccaataaaaaacttgtctgagaagcttacatctg 420

                                                                       
Query: 446 gtgggatcattcacaaactgtggattgaacaacctgaaaacttccctacatgcctcgcca 505
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtgggatcattcaccaactgtggattgaacaacctgaaaacttccctacatgcctcgcca 480

                                                                     
Query: 506 caaaaccttaccccaagtcagttgtatctccgtatttcaagaagttgaaactctgcaa 563
           | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaaaccttacccccagtcagttgtatctccgtatttcaagaagttgaaactctgcaa 538