Miyakogusa Predicted Gene
- Lj0g3v0149169.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0149169.1 Non Chatacterized Hit- tr|D8RKZ1|D8RKZ1_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43,4e-18,Tim17,Mitochondrial inner membrane translocase subunit
Tim17/Tim22/Tim23/peroxisomal protein PMP24; ,CUFF.9146.1
(441 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66730 similar to UniRef100_Q41050 Cluster: Core prote... 874 0.0
gnl|LJGI|BP034424 similar to UniRef100_Q41050 Cluster: Core prot... 484 e-136
gnl|LJGI|DC593969 similar to UniRef100_Q41050 Cluster: Core prot... 392 e-109
gnl|LJGI|BW598602 similar to UniRef100_Q41050 Cluster: Core prot... 230 6e-60
gnl|LJGI|BP060027 UniRef100_Q41050 Cluster: Core protein; n=1; P... 125 2e-28
>gnl|LJGI|TC66730 similar to UniRef100_Q41050 Cluster: Core protein; n=1; Pisum
sativum|Rep: Core protein - Pisum sativum (Garden pea),
complete
Length = 842
Score = 874 bits (441), Expect = 0.0
Identities = 441/441 (100%)
Strand = Plus / Plus
Query: 1 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 225
Query: 61 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgttgca 285
Query: 121 gccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatctcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatctcaagt 345
Query: 181 aatgacttccagaaaacgctgaagaagatgtgtaaagaaggtgcatattggggaaccgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aatgacttccagaaaacgctgaagaagatgtgtaaagaaggtgcatattggggaaccgta 405
Query: 241 gctggcttatacgttgggatggaatatggcgtagagaggatcagaggcagaagggactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gctggcttatacgttgggatggaatatggcgtagagaggatcagaggcagaagggactgg 465
Query: 301 aagaacgccatgcttggaggtgcagtaactggggctctggtatctgcagccagcggtgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aagaacgccatgcttggaggtgcagtaactggggctctggtatctgcagccagcggtgac 525
Query: 361 aagagtgacaagattgcaattgatgccattacaggggcagcaattgcgactgctgcggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 aagagtgacaagattgcaattgatgccattacaggggcagcaattgcgactgctgcggaa 585
Query: 421 ttcataaattaccttacctga 441
|||||||||||||||||||||
Sbjct: 586 ttcataaattaccttacctga 606
>gnl|LJGI|BP034424 similar to UniRef100_Q41050 Cluster: Core protein; n=1; Pisum
sativum|Rep: Core protein - Pisum sativum (Garden pea),
partial (55%)
Length = 531
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 198 gctgaagaagatgtgtaaagaaggtgcatattggggaaccgtagctggcttatacgttgg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 gctgaagaagatgtgtaaagaaggtgcatattggggaaccgtagctggcttatacgttgg 293
Query: 258 gatggaatatggcgtagagaggatcagaggcagaagggactggaagaacgccatgcttgg 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gatggaatatggcgtagagaggatcagaggcagaagggactggaagaacgccatgcttgg 233
Query: 318 aggtgcagtaactggggctctggtatctgcagccagcggtgacaagagtgacaagattgc 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 aggtgcagtaactggggctctggtatctgcagccagcggtgacaagagtgacaagattgc 173
Query: 378 aattgatgccattacaggggcagcaattgcgactgctgcggaattcataaattaccttac 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aattgatgccattacaggggcagcaattgcgactgctgcggaattcataaattaccttac 113
Query: 438 ctga 441
||||
Sbjct: 112 ctga 109
>gnl|LJGI|DC593969 similar to UniRef100_Q41050 Cluster: Core protein; n=1; Pisum
sativum|Rep: Core protein - Pisum sativum (Garden pea),
partial (45%)
Length = 583
Score = 392 bits (198), Expect = e-109
Identities = 198/198 (100%)
Strand = Plus / Plus
Query: 1 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 101
Query: 61 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgttgca 161
Query: 121 gccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatctcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 gccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatctcaagt 221
Query: 181 aatgacttccagaaaacg 198
||||||||||||||||||
Sbjct: 222 aatgacttccagaaaacg 239
>gnl|LJGI|BW598602 similar to UniRef100_Q41050 Cluster: Core protein; n=1; Pisum
sativum|Rep: Core protein - Pisum sativum (Garden pea),
partial (45%)
Length = 477
Score = 230 bits (116), Expect = 6e-60
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 atgcctttaagcagcatttcagggtcggtttcctctcccaaggtggatgttgcaattgac 214
Query: 61 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 atgggcaatccattcctgaacctcaccgtcgatggtttcttgaagatcggagccgt 270
Score = 167 bits (84), Expect = 7e-41
Identities = 84/84 (100%)
Strand = Plus / Plus
Query: 115 gttgcagccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gttgcagccacgcgtgcagctgctgaggatacctatcatatcatcaaaaagggaagtatc 434
Query: 175 tcaagtaatgacttccagaaaacg 198
||||||||||||||||||||||||
Sbjct: 435 tcaagtaatgacttccagaaaacg 458
>gnl|LJGI|BP060027 UniRef100_Q41050 Cluster: Core protein; n=1; Pisum sativum|Rep:
Core protein - Pisum sativum (Garden pea), partial (10%)
Length = 378
Score = 125 bits (63), Expect = 2e-28
Identities = 150/167 (89%), Gaps = 13/167 (7%)
Strand = Plus / Minus
Query: 288 cagaagggac--tggaagaacgc-catgcttggaggtg---cagtaac-tggggc-tctg 339
|||||||||| ||||||||||| ||||||||||||| ||||||| |||||| ||||
Sbjct: 339 cagaagggacnntggaagaacgcncatgcttggaggtnngccagtaacntggggcntctg 280
Query: 340 gtatctgc-agcca-gcggtgaca-agagtgaca-agattgcaattgatgccattaca-g 394
|||||||| ||||| |||||||| |||||||| |||||||||||||||||||||| |
Sbjct: 279 gtatctgccagccacgcggtgacccagagtgacccagattgcaattgatgccattacccg 220
Query: 395 gggcagcaattgcgactgctgcggaattcataaattaccttacctga 441
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gggcagcaattgcgactgctgcggaattcataaattaccttacctga 173