Miyakogusa Predicted Gene

Lj0g3v0147879.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0147879.1 Non Chatacterized Hit- tr|J3MB50|J3MB50_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB06G1,56.04,2e-19,Ran
BP2/NZF zinc finger-like,NULL; ZF_RANBP2_1,Zinc finger, RanBP2-type;
seg,NULL; ZF_RANBP2_2,Zinc ,GO025651.path2.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO025651 similar to UniRef100_A7P7R9 Cluster: Chromosom...   563   e-160

>gnl|LJGI|GO025651 similar to UniRef100_A7P7R9 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (55%)
          Length = 376

 Score =  563 bits (284), Expect = e-160
 Identities = 287/288 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgagcaggcccggagattggaactgcaggtcctgccagcacctgaactttcagaggaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  atgagcaggcccggagattggaactgcaggtcctgccagcacctgaactttcagaggaga 146

                                                                       
Query: 61  gattcatgccagcgatgtggggactccaaatatggagacaggatcgattttggggcattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gattcatgccagcgatgtggggactccaaatatggagacaggatcgattttggggcattt 206

                                                                       
Query: 121 ggaggtggaattagaggagggtcttcatttgggttgagcggttcagatgttcgcccaggt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaggtggaattagaggagggtcttcatttgggttgagcggttcagatgttcgcccaggt 266

                                                                       
Query: 181 gactggtactgtgctgctgctaactgtggtgcacacaactttgctagccgctcaagctgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gactggtactgtgctgctgctaactgtggtgcacacaactttgctagccgctcaagctgc 326

                                                           
Query: 241 ttcaaatgtggtgcattcaaggatgacttagttggaggcttcagcagc 288
           ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 ttcaaatgtggtgcattcaaggatgacttagttggaggcttcaccagc 374