Miyakogusa Predicted Gene

Lj0g3v0147759.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0147759.1 tr|Q0J184|Q0J184_ORYSJ Os09g0457400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0457400 PE=2
SV=,55.29,3e-19,seg,NULL; no description,Glycoside hydrolase,
catalytic domain; ALPHA-AMYLASE,NULL; ALPHA-AMYLASE,Gl,CUFF.9033.1
         (564 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS352630 similar to UniRef100_Q94A41 Cluster: At1g69830...   178   2e-44
gnl|LJGI|TC80179 homologue to UniRef100_A9XIJ6 Cluster: NADH deh...    76   3e-13

>gnl|LJGI|FS352630 similar to UniRef100_Q94A41 Cluster: At1g69830/T17F3_14; n=1;
           Arabidopsis thaliana|Rep: At1g69830/T17F3_14 -
           Arabidopsis, partial (4%)
          Length = 629

 Score =  178 bits (90), Expect = 2e-44
 Identities = 140/156 (89%), Gaps = 3/156 (1%)
 Strand = Plus / Minus

                                                                       
Query: 342 atctcataaatctggaagatggtacttggagcttaaagagaaagctgca---gaactaat 398
           |||||||||| ||||||||||||| |||| |||||||||||||| ||||   ||||||||
Sbjct: 483 atctcataaacctggaagatggtagttggggcttaaagagaaagttgcatcagaactaat 424

                                                                       
Query: 399 gtctttaggcttcactgtgatttggttaccaccacctacagaatctgtttcaccagaagg 458
           |||||||||||||  |||||||||||||  |||||||||  |||||| ||||| ||||||
Sbjct: 423 gtctttaggcttctttgtgatttggttatgaccacctacgaaatctgattcacgagaagg 364

                                               
Query: 459 atacatgccaaaggatttatacaatttaaattctag 494
           ||||||||||||||||||||||||||||| ||||||
Sbjct: 363 atacatgccaaaggatttatacaatttaatttctag 328


>gnl|LJGI|TC80179 homologue to UniRef100_A9XIJ6 Cluster: NADH dehydrogenase subunit
           2; n=1; Biomphalaria tenagophila|Rep: NADH dehydrogenase
           subunit 2 - Biomphalaria tenagophila (Bloodfluke
           planorb), partial (5%)
          Length = 465

 Score = 75.8 bits (38), Expect = 3e-13
 Identities = 93/110 (84%), Gaps = 1/110 (0%)
 Strand = Plus / Plus

                                                                       
Query: 341 aatctcataaatctggaagatggtacttggagcttaaagagaaagctgcagaactaatgt 400
           ||||||||  |||| |||| ||||| |||| |||| ||||||||| ||||||||| ||||
Sbjct: 253 aatctcattcatctagaaggtggtagttggggcttgaagagaaagatgcagaacttatgt 312

                                                             
Query: 401 ctttaggcttcactgtga-tttggttaccaccacctacagaatctgtttc 449
           ||||||||| || ||||| ||||||||| |||| |||   ||||||||||
Sbjct: 313 ctttaggctccattgtgactttggttacgaccagctatgaaatctgtttc 362