Miyakogusa Predicted Gene

Lj0g3v0147699.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0147699.1 tr|F2CQW9|F2CQW9_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,47.87,9e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; DUF1421,Protein of unknown function
DUF14,NODE_31384_length_703_cov_162.046936.path2.1
         (651 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted ...  1021   0.0  
gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted ...   297   4e-80

>gnl|LJGI|TC77371 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (35%)
          Length = 1361

 Score = 1021 bits (515), Expect = 0.0
 Identities = 515/515 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgtctggaccatccggcctcagcaactgcagttccaagggatttgattttcgctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atggcgtctggaccatccggcctcagcaactgcagttccaagggatttgattttcgctcc 382

                                                                       
Query: 61  gatgatgttctctgttcatacgaggattttaccgagcaggattcttctaatggcaataac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gatgatgttctctgttcatacgaggattttaccgagcaggattcttctaatggcaataac 442

                                                                       
Query: 121 atcgatcccagtaaggattttcacatatcaaggatgacaaaagcagcagcattgcctgct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atcgatcccagtaaggattttcacatatcaaggatgacaaaagcagcagcattgcctgct 502

                                                                       
Query: 181 actgcctatggctcacctgaaggttctttaggccaagatgtgattgcaacagttgagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actgcctatggctcacctgaaggttctttaggccaagatgtgattgcaacagttgagaag 562

                                                                       
Query: 241 agtataaaaacatattctgacaaccttatgaggtttcttgagggaattggttcaaggcta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agtataaaaacatattctgacaaccttatgaggtttcttgagggaattggttcaaggcta 622

                                                                       
Query: 301 tcacagttggaattatattgttataatcttgacaaatcaattggggaaatgcgatctgat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcacagttggaattatattgttataatcttgacaaatcaattggggaaatgcgatctgat 682

                                                                       
Query: 361 ttgaacagtgaccatgaggaggcagattcaaaactcaaatctattgagaaacacgttcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttgaacagtgaccatgaggaggcagattcaaaactcaaatctattgagaaacacgttcag 742

                                                                       
Query: 421 gaagtacataggtctgtacaaattttaaaagacaagcaagagctagctgacgctcagaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaagtacataggtctgtacaaattttaaaagacaagcaagagctagctgacgctcagaaa 802

                                              
Query: 481 gaattagccaagcttcaacttgtacagaaagaatc 515
           |||||||||||||||||||||||||||||||||||
Sbjct: 803 gaattagccaagcttcaacttgtacagaaagaatc 837


>gnl|LJGI|TC58286 similar to UniRef100_Q9M0H8 Cluster: Predicted proline-rich
           protein; n=1; Arabidopsis thaliana|Rep: Predicted
           proline-rich protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (40%)
          Length = 1035

 Score =  297 bits (150), Expect = 4e-80
 Identities = 279/322 (86%)
 Strand = Plus / Plus

                                                                       
Query: 194 cacctgaaggttctttaggccaagatgtgattgcaacagttgagaagagtataaaaacat 253
           ||||||||| ||||||| ||||||||||||||||||| || ||||||||||| |||| ||
Sbjct: 325 cacctgaagattctttaagccaagatgtgattgcaactgtagagaagagtatgaaaaaat 384

                                                                       
Query: 254 attctgacaaccttatgaggtttcttgagggaattggttcaaggctatcacagttggaat 313
           || | |||||||| ||| ||||||| ||||| ||| |||| ||||| |||||||||||||
Sbjct: 385 atacggacaacctcatgcggtttctggaggggattagttcgaggctttcacagttggaat 444

                                                                       
Query: 314 tatattgttataatcttgacaaatcaattggggaaatgcgatctgatttgaacagtgacc 373
           ||||||| || |||||||||||||| ||||| ||||||  |||||| |||||  ||||||
Sbjct: 445 tatattgctacaatcttgacaaatctattggagaaatgaaatctgaattgaatcgtgacc 504

                                                                       
Query: 374 atgaggaggcagattcaaaactcaaatctattgagaaacacgttcaggaagtacataggt 433
           | | ||||  ||||||||| || |||||| |||| || ||| |||| ||||| || ||||
Sbjct: 505 acggggagcaagattcaaagctgaaatctcttgaaaagcaccttcaagaagttcacaggt 564

                                                                       
Query: 434 ctgtacaaattttaaaagacaagcaagagctagctgacgctcagaaagaattagccaagc 493
           ||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||
Sbjct: 565 ctgtacaaattttaagagacaagcaagagctagctgagactcagaaagaattagccaagc 624

                                 
Query: 494 ttcaacttgtacagaaagaatc 515
           ||||||| |  |||||||||||
Sbjct: 625 ttcaactcgctcagaaagaatc 646