Miyakogusa Predicted Gene
- Lj0g3v0147309.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0147309.1 CUFF.9002.1
(1569 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67027 weakly similar to UniRef100_A7PCS2 Cluster: Chr... 1144 0.0
gnl|LJGI|TC74680 weakly similar to UniRef100_Q1V1U6 Cluster: Deo... 307 1e-82
gnl|LJGI|TC65672 similar to UniRef100_A7PCS2 Cluster: Chromosome... 242 6e-63
gnl|LJGI|FS335430 similar to UniRef100_A7PCS2 Cluster: Chromosom... 84 3e-15
>gnl|LJGI|TC67027 weakly similar to UniRef100_A7PCS2 Cluster: Chromosome chr17
scaffold_12, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_12, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (28%)
Length = 919
Score = 1144 bits (577), Expect = 0.0
Identities = 580/581 (99%)
Strand = Plus / Plus
Query: 1 atggatcccaaccctggaacctttccgattctctcctacgtcatgtcccgcctcccttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 atggatcccaaccctggaacctttccgattctctcctacgtcatgtcccgcctcccttcc 398
Query: 61 ttcgcacccaggaccaccgccgcctctccttccgattccgaccaattcgacatcgaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttcgcacccaggaccaccgccgcctctccttccgattccgaccaattcgacatcgaacag 458
Query: 121 ccgccgccgccgtcgtcggagatcgtcggccaaatgccgcacctggcggacccggagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ccgccgccgccgtcgtcggagatcgtcggccaaatgccgcacctggcggacccggagctc 518
Query: 181 ctggcctctatgggtcgggccatctcggacgtctcgcaggcccgcaccgtcctcaacctg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 519 ctggcctctatgggtcgggccatctcggacgtctcgcaggctcgcaccgtcctcaacctg 578
Query: 241 atcggcgagcggcccacccacgaggaagtcgacaacgcgcgggcaaagctggcggacatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 atcggcgagcggcccacccacgaggaagtcgacaacgcgcgggcaaagctggcggacatc 638
Query: 301 gacgcccagctctcccgtcagctagaagagatcgtcctccagtcgaggcccacggagatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gacgcccagctctcccgtcagctagaagagatcgtcctccagtcgaggcccacggagatc 698
Query: 361 gagatccatgggtggcgggcccaccaggccgagaacgagagacagtgcagggaagcggcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gagatccatgggtggcgggcccaccaggccgagaacgagagacagtgcagggaagcggcg 758
Query: 421 gagaaagaacagcgcgtttggaaatcggtgttgcagctggacgagatgcacgaggcgtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gagaaagaacagcgcgtttggaaatcggtgttgcagctggacgagatgcacgaggcgtac 818
Query: 481 gagaagctgctcaaggacgctgagaaccggttggtgagaatgtacgagactaaggaagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gagaagctgctcaaggacgctgagaaccggttggtgagaatgtacgagactaaggaagac 878
Query: 541 ggaggagaagataatagggatcttgatcttgatcttgttgt 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 ggaggagaagataatagggatcttgatcttgatcttgttgt 919
>gnl|LJGI|TC74680 weakly similar to UniRef100_Q1V1U6 Cluster: Deoxynucleotidase; n=1;
Candidatus Pelagibacter ubique HTCC1002|Rep:
Deoxynucleotidase - Candidatus Pelagibacter ubique
HTCC1002, partial (4%)
Length = 560
Score = 307 bits (155), Expect = 1e-82
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1415 aaatgcaagaacaaggagagggtggctggttaacacgaagcacctcctggttgaagaatg 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaatgcaagaacaaggagagggtggctggttaacacgaagcacctcctggttgaagaatg 60
Query: 1475 tttctggaaatgtaattggatatattggagctgttgggtctcccatgtcacccaaatctc 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttctggaaatgtaattggatatattggagctgttgggtctcccatgtcacccaaatctc 120
Query: 1535 ccagagatgcattccttgatcagcaactatgaggt 1569
|||||||||||||||||||||||||||||||||||
Sbjct: 121 ccagagatgcattccttgatcagcaactatgaggt 155
>gnl|LJGI|TC65672 similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 645
Score = 242 bits (122), Expect = 6e-63
Identities = 242/282 (85%)
Strand = Plus / Plus
Query: 1208 gggaattggatcttagcaacaatcagattcaagcacttcccgatacatttggccgccttg 1267
||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 1 gggaattggatctcagcaacaatcaaattcatgcacttcctgatacatttggccgccttg 60
Query: 1268 ataatttgacgaagctaaacttggagcagaatcctcttgaattgccaccaatggagattg 1327
|||||||||| ||||| |||||||||||||| ||||||||| ||||||| ||||||||||
Sbjct: 61 ataatttgaccaagctgaacttggagcagaaccctcttgaagtgccacctatggagattg 120
Query: 1328 taaatcaaggggtccaagccataaagactcatatggccaagaggtggattgacatattgc 1387
||||||| || ||||||||||||||| | |||||||||||||||||||| ||||||
Sbjct: 121 taaatcatggtgtccaagccataaagtcattcatggccaagaggtggattgaaatattgg 180
Query: 1388 tggaggaagaaaggaaaagcaatcaagaaatgcaagaacaaggagagggtggctggttaa 1447
|||||||| |||||| || || ||| | | |||| |||| || ||| ||| |||
Sbjct: 181 cagaggaagataggaaacacacacaggaatttccagaagaagggcagaatgggtggctaa 240
Query: 1448 cacgaagcacctcctggttgaagaatgtttctggaaatgtaa 1489
| ||||| ||||||||||| ||||||||||||| ||||||||
Sbjct: 241 ctcgaagtacctcctggttaaagaatgtttctgtaaatgtaa 282
>gnl|LJGI|FS335430 similar to UniRef100_A7PCS2 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 677
Score = 83.8 bits (42), Expect = 3e-15
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 1249 gatacatttggccgccttgataatttgacgaagctaaacttggagcagaatcctcttgaa 1308
||||||||||| |||||| |||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 45 gatacatttggtcgccttcataatttgaccaagctgaacttggagcagaaccctcttgaa 104
Query: 1309 ttgcca 1314
|||||
Sbjct: 105 gtgcca 110
Score = 65.9 bits (33), Expect = 7e-10
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 1445 taacacgaagcacctcctggttgaagaatgtttctggaaatgtaa 1489
|||| ||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 224 taactcgaagtacctcctggttgaagaatgtttctgtaaatgtaa 268