Miyakogusa Predicted Gene
- Lj0g3v0147079.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0147079.2 Non Chatacterized Hit- tr|G3B5B8|G3B5B8_CANTC
Putative uncharacterized protein OS=Candida tenuis
(st,40,1.3,seg,NULL,CUFF.8975.2
(357 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82682 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3;... 272 1e-72
gnl|LJGI|GO012486 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3... 240 5e-63
gnl|LJGI|DC597999 UniRef100_O22385 Cluster: Glycine-rich protein... 98 4e-20
gnl|LJGI|TC76000 similar to UniRef100_Q4V4D2 Cluster: IP08637p; ... 78 4e-14
gnl|LJGI|TC81544 66 2e-10
gnl|LJGI|TC74738 66 2e-10
gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated ... 56 2e-07
>gnl|LJGI|TC82682 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3; n=1; Lotus
japonicus|Rep: VDAC1.3 - Lotus japonicus, partial (13%)
Length = 750
Score = 272 bits (137), Expect = 1e-72
Identities = 166/177 (93%), Gaps = 9/177 (5%)
Strand = Plus / Plus
Query: 104 ctcccaccctcattcctatccatggtacgacgacgacgacaccgcag---------gccg 154
|||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 268 ctcccaacctcattcctatccatggtacgacgacgacgacaccgcaggtactgcaggccg 327
Query: 155 aagcttatttgtatatactatggattgtctcaatcgcatctctcatagcctgctccgatg 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagcttatttgtatatactatggattgtctcaatcgcatctctcatagcctgctccgatg 387
Query: 215 cattgatttcatcccctcgaccttccaattctctcgaacttcaatcgcatatctcaa 271
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 388 cattgatttcatcccctcgaccttccaattctctcgaacttcaatcgcatctctcaa 444
Score = 127 bits (64), Expect = 5e-29
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 1 atggacccttccaatcgcaccttgaagcctcaaacgttgggagggagtaaaaccttcaac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 atggacccttccaatcgcaccttgaagcctcaaacgttgggagggagtaaaaccttcaaa 129
Query: 61 ctgcttgc 68
||||||||
Sbjct: 130 ctgcttgc 137
>gnl|LJGI|GO012486 homologue to UniRef100_Q6W2J3 Cluster: VDAC1.3; n=1; Lotus
japonicus|Rep: VDAC1.3 - Lotus japonicus, partial (11%)
Length = 748
Score = 240 bits (121), Expect = 5e-63
Identities = 124/125 (99%)
Strand = Plus / Plus
Query: 147 gcaggccgaagcttatttgtatatactatggattgtctcaatcgcatctctcatagcctg 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcaggccgaagcttatttgtatatactatggattgtctcaatcgcatctctcatagcctg 322
Query: 207 ctccgatgcattgatttcatcccctcgaccttccaattctctcgaacttcaatcgcatat 266
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 ctccgatgcattgatttcatcccctcgaccttccaattctctcgaacttcaatcgcatct 382
Query: 267 ctcaa 271
|||||
Sbjct: 383 ctcaa 387
>gnl|LJGI|DC597999 UniRef100_O22385 Cluster: Glycine-rich protein; n=1; Oryza
sativa|Rep: Glycine-rich protein - Oryza sativa (Rice),
partial (6%)
Length = 570
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 178 attgtctcaatcgcatctctcatagcctgctccgatgcattgatttcatcccctcga 234
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 514 attgtctcaatggcatctctcatagcctgctccgatgcattgatttcatccactcga 570
>gnl|LJGI|TC76000 similar to UniRef100_Q4V4D2 Cluster: IP08637p; n=1; Drosophila
melanogaster|Rep: IP08637p - Drosophila melanogaster
(Fruit fly), partial (9%)
Length = 778
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 292 ttgaggtcccaaattctccagatcctccataaaggtaagagct 334
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4 ttgaggtcccaaattctccagatcctccataaaggtacgagct 46
>gnl|LJGI|TC81544
Length = 1148
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 296 ggtcccaaattctccagatcctccataaaggta 328
|||||||||||||||||||||||||||||||||
Sbjct: 424 ggtcccaaattctccagatcctccataaaggta 456
>gnl|LJGI|TC74738
Length = 502
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 296 ggtcccaaattctccagatcctccataaaggta 328
|||||||||||||||||||||||||||||||||
Sbjct: 405 ggtcccaaattctccagatcctccataaaggta 437
>gnl|LJGI|DC593375 UniRef100_A3UCX2 Cluster: Membrane-associated protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep:
Membrane-associated protein - Oceanicaulis alexandrii
HTCC2633, partial (10%)
Length = 587
Score = 56.0 bits (28), Expect = 2e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 atggacccttccaatcgcaccttgaagcctcaaacg 36
|||| |||||||||||||| ||||||||||||||||
Sbjct: 302 atggccccttccaatcgcatcttgaagcctcaaacg 337