Miyakogusa Predicted Gene
- Lj0g3v0146989.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0146989.1 Non Chatacterized Hit- tr|D8S066|D8S066_SELML
Putative uncharacterized protein OS=Selaginella
moelle,34.74,5e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FROUNT
PROTEIN-RELATED,NULL; Nucleopor_Nup85,Nucleoporin
Nup85-l,gene.g11122.t1.1
(594 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62744 UniRef100_A2A1E8 Cluster: Nucleoporin; n=1; Lot... 839 0.0
>gnl|LJGI|TC62744 UniRef100_A2A1E8 Cluster: Nucleoporin; n=1; Lotus japonicus|Rep:
Nucleoporin - Lotus japonicus, complete
Length = 2469
Score = 839 bits (423), Expect = 0.0
Identities = 423/423 (100%)
Strand = Plus / Plus
Query: 1 atgccctccgacacagtcggcaatggcgtcctggtcccattctccggcgagggcagtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atgccctccgacacagtcggcaatggcgtcctggtcccattctccggcgagggcagtgac 83
Query: 61 tccgtcgcggtttaccctctcaaccatggcctctcccttccaatttctcgcgtcgccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tccgtcgcggtttaccctctcaaccatggcctctcccttccaatttctcgcgtcgccatc 143
Query: 121 tcctggtcccgcggcaactccctccgcgtctcccttttcgccgaaccttctgcaaccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tcctggtcccgcggcaactccctccgcgtctcccttttcgccgaaccttctgcaaccagt 203
Query: 181 cccgactcccaagcatccggcgccaaggtcgtcgaagttaaactcagcggcgaagatccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cccgactcccaagcatccggcgccaaggtcgtcgaagttaaactcagcggcgaagatccg 263
Query: 241 gagatctccgactctaattggcggcgaatcgcctacggctccgtcacgcccttcgcgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagatctccgactctaattggcggcgaatcgcctacggctccgtcacgcccttcgcgctg 323
Query: 301 cttcagagtcgccggagctctcttgccgctttgtcaaagtctccctcgccgtatcatgta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cttcagagtcgccggagctctcttgccgctttgtcaaagtctccctcgccgtatcatgta 383
Query: 361 gattggtgggagcatgtgcttgagtatagtaaggatatagcttcacttcttggggggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattggtgggagcatgtgcttgagtatagtaaggatatagcttcacttcttggggggcca 443
Query: 421 aag 423
|||
Sbjct: 444 aag 446
Score = 313 bits (158), Expect = 7e-85
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 424 gatttcgacagcctctttactagtacacatgaaaccattcatggcaaacttgtcaatttt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gatttcgacagcctctttactagtacacatgaaaccattcatggcaaacttgtcaatttt 662
Query: 484 cagaaagagcttgtcaatatacaggtgattgaggatgatcctagatattgggaagtgatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagaaagagcttgtcaatatacaggtgattgaggatgatcctagatattgggaagtgatg 722
Query: 544 tcatctgcattgtcagttggttggcttgatattgtggt 581
||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tcatctgcattgtcagttggttggcttgatattgtggt 760