Miyakogusa Predicted Gene
- Lj0g3v0146819.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0146819.2 tr|Q6X9T2|Q6X9T2_HORVD SNAP25-like protein C
(Fragment) OS=Hordeum vulgare var. distichum PE=4
SV=1,49.52,0.000000000000002,SNARE,Target SNARE coiled-coil domain;
SUBFAMILY NOT NAMED,NULL; SYNAPTOSOMAL ASSOCIATED
PROTEIN,NUL,CUFF.8965.2
(912 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57215 weakly similar to UniRef100_Q10Q25 Cluster: SNA... 1808 0.0
gnl|LJGI|TC65767 similar to UniRef100_A7P2H5 Cluster: Chromosome... 1142 0.0
gnl|LJGI|GO023542 similar to UniRef100_A7P2H5 Cluster: Chromosom... 575 e-163
gnl|LJGI|TC62699 similar to UniRef100_A7PDF9 Cluster: Chromosome... 281 4e-75
gnl|LJGI|TC78644 similar to UniRef100_Q10Q25 Cluster: SNARE doma... 76 4e-13
gnl|LJGI|FS358773 similar to UniRef100_Q8CDN8 Cluster: Coiled-co... 52 6e-06
>gnl|LJGI|TC57215 weakly similar to UniRef100_Q10Q25 Cluster: SNARE domain containing
protein, expressed; n=1; Oryza sativa Japonica Group|Rep:
SNARE domain containing protein, expressed - Oryza sativa
subsp. japonica (Rice), partial (70%)
Length = 1341
Score = 1808 bits (912), Expect = 0.0
Identities = 912/912 (100%)
Strand = Plus / Plus
Query: 1 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 163
Query: 61 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 223
Query: 121 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 283
Query: 181 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 343
Query: 241 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcaggagttggagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcaggagttggagaac 403
Query: 301 tatgccgtgtacaaatctgaagagactacaaagtcagtaaacaactgtttgaagatagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tatgccgtgtacaaatctgaagagactacaaagtcagtaaacaactgtttgaagatagct 463
Query: 361 gaggaaataagagaggatgctaccaatacattagtgatgctgcatcagcaaggcgagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gaggaaataagagaggatgctaccaatacattagtgatgctgcatcagcaaggcgagcag 523
Query: 421 attacaaggagtcacgatgttgctgctgatattgatcatgatctaagtcggggagaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 attacaaggagtcacgatgttgctgctgatattgatcatgatctaagtcggggagaaaag 583
Query: 481 cttttgggaagtcttggaggcatgttctccagaacttggaaaccaaagaagacaggcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cttttgggaagtcttggaggcatgttctccagaacttggaaaccaaagaagacaggcaca 643
Query: 541 ataactggccctgttatttttggagctgatccagtcagaagaaatggcaaccactcggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ataactggccctgttatttttggagctgatccagtcagaagaaatggcaaccactcggag 703
Query: 601 cagagagagaagttaggattgacttcttcagctcctaaagggcagtcaaagccgcggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cagagagagaagttaggattgacttcttcagctcctaaagggcagtcaaagccgcggaaa 763
Query: 661 tcactttctgagccaacaaatgcatttgaaaaagttgaggttgaaaaagggaagcaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tcactttctgagccaacaaatgcatttgaaaaagttgaggttgaaaaagggaagcaagat 823
Query: 721 gatgcattgtcagatattagtgatctcttaggagaattgaagggcatggccatggacatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 gatgcattgtcagatattagtgatctcttaggagaattgaagggcatggccatggacatg 883
Query: 781 ggatctgaaattgacaggcatatcaacgccatggatggttttgacaaagatgttgagaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 ggatctgaaattgacaggcatatcaacgccatggatggttttgacaaagatgttgagaag 943
Query: 841 ctgagtatccgtatgaatggtgctaatcaacgcggtcgtcatttacttggaaaagcacac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ctgagtatccgtatgaatggtgctaatcaacgcggtcgtcatttacttggaaaagcacac 1003
Query: 901 agatcatgagat 912
||||||||||||
Sbjct: 1004 agatcatgagat 1015
>gnl|LJGI|TC65767 similar to UniRef100_A7P2H5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (44%)
Length = 816
Score = 1142 bits (576), Expect = 0.0
Identities = 576/576 (100%)
Strand = Plus / Plus
Query: 1 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 300
Query: 61 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 360
Query: 121 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 420
Query: 181 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 480
Query: 241 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcaggagttggagaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcaggagttggagaac 540
Query: 301 tatgccgtgtacaaatctgaagagactacaaagtcagtaaacaactgtttgaagatagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatgccgtgtacaaatctgaagagactacaaagtcagtaaacaactgtttgaagatagct 600
Query: 361 gaggaaataagagaggatgctaccaatacattagtgatgctgcatcagcaaggcgagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaggaaataagagaggatgctaccaatacattagtgatgctgcatcagcaaggcgagcag 660
Query: 421 attacaaggagtcacgatgttgctgctgatattgatcatgatctaagtcggggagaaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attacaaggagtcacgatgttgctgctgatattgatcatgatctaagtcggggagaaaag 720
Query: 481 cttttgggaagtcttggaggcatgttctccagaacttggaaaccaaagaagacaggcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cttttgggaagtcttggaggcatgttctccagaacttggaaaccaaagaagacaggcaca 780
Query: 541 ataactggccctgttatttttggagctgatccagtc 576
||||||||||||||||||||||||||||||||||||
Sbjct: 781 ataactggccctgttatttttggagctgatccagtc 816
>gnl|LJGI|GO023542 similar to UniRef100_A7P2H5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 576
Score = 575 bits (290), Expect = e-163
Identities = 293/294 (99%)
Strand = Plus / Plus
Query: 1 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atggttggttcaaagaaatcacctttgaaatatgctaagcctagctcagttgaccctgtc 342
Query: 61 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tctaagcataaaaacccctttgattctgatgaagagacaaaagataacaaaaaacatgtt 402
Query: 121 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tctggacatggtctagtttcaagagagagtaacaccaacccctttgatgatgattatgcc 462
Query: 181 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agtggccactcttcatcatcttcttatgctgtttcatcagccaataatccaaacaggtac 522
Query: 241 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcaggagttg 294
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 523 aagaatggtttccgcgattctggggggttggagagtcaatcagtgcacgagttg 576
>gnl|LJGI|TC62699 similar to UniRef100_A7PDF9 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (85%)
Length = 1414
Score = 281 bits (142), Expect = 4e-75
Identities = 399/484 (82%), Gaps = 3/484 (0%)
Strand = Plus / Plus
Query: 317 ctgaagagactacaaagtcagtaaacaactgtttgaagatagctgaggaaataagagagg 376
|||||||||||||||| ||||| ||||| |||||||||||||| ||| | ||||||||||
Sbjct: 622 ctgaagagactacaaaatcagtcaacaattgtttgaagatagcagagaacataagagagg 681
Query: 377 atgctaccaatacattagtgatgctgcatcagcaaggcgagcagattacaaggagtcacg 436
|||||||||| || ||||| | || || || || || ||||| ||||| |||||||||
Sbjct: 682 atgctaccaagactttagtcactcttcaccaacagggtgagcaaattaccaggagtcact 741
Query: 437 atgttgctgctgatattgatcatgatctaagtcggggagaaaagcttttgggaagtcttg 496
||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 742 atgttgctgctgacattgatcatgacttaagtcggggagaaaagcttttgggaagccttg 801
Query: 497 gaggcatgttctccagaacttggaaaccaaagaagacaggcacaataactggccctgtta 556
| ||| | ||||||| ||||||||| || ||||||||| | |||||| ||||||||||
Sbjct: 802 gtggcctcttctccaaaacttggaagccgaagaagacacgtgcaataagaggccctgtta 861
Query: 557 tttttggagctgatccagtcagaagaaatggcaaccactcggagcagagagagaagttag 616
||||||||| | ||||||| || ||| | | |||||||| ||| |||||||||||||| |
Sbjct: 862 tttttggagataatccagttagcagacaggccaaccacttggaacagagagagaagttgg 921
Query: 617 gattgacttcttcagctcctaaagggcagtcaaagccgcggaaatcactttctgagccaa 676
||||||||||| || || | |||||| | ||| ||| | ||| | || ||
Sbjct: 922 gattgacttct---gcacccagagggcaaactaagatgcgaaccccacctcacgaatcat 978
Query: 677 caaatgcatttgaaaaagttgaggttgaaaaagggaagcaagatgatgcattgtcagata 736
||| |||| || ||||||||||| |||||||||||||||||||||||||| | || |||
Sbjct: 979 caactgcacttcaaaaagttgagtttgaaaaagggaagcaagatgatgcactttcggatt 1038
Query: 737 ttagtgatctcttaggagaattgaagggcatggccatggacatgggatctgaaattgaca 796
| |||||||| || ||||| | || | ||||||||| ||||||||||| |||||||| |
Sbjct: 1039 taagtgatctgttgggagagcttaaagacatggccattgacatgggatccgaaattgaga 1098
Query: 797 ggca 800
||||
Sbjct: 1099 ggca 1102
>gnl|LJGI|TC78644 similar to UniRef100_Q10Q25 Cluster: SNARE domain containing
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: SNARE domain containing protein, expressed -
Oryza sativa subsp. japonica (Rice), partial (27%)
Length = 776
Score = 75.8 bits (38), Expect = 4e-13
Identities = 80/94 (85%)
Strand = Plus / Plus
Query: 701 ttgaaaaagggaagcaagatgatgcattgtcagatattagtgatctcttaggagaattga 760
|||||||||||||||||||||||||| | || ||| | |||||||| || ||||| | |
Sbjct: 94 ttgaaaaagggaagcaagatgatgcactttcggatttaagtgatctgttgggagagctta 153
Query: 761 agggcatggccatggacatgggatctgaaattga 794
| | ||||||||| ||||||||||| ||||||||
Sbjct: 154 aagacatggccattgacatgggatccgaaattga 187
>gnl|LJGI|FS358773 similar to UniRef100_Q8CDN8 Cluster: Coiled-coil domain-containing
protein 38; n=1; Mus musculus|Rep: Coiled-coil
domain-containing protein 38 - Mus musculus (Mouse),
partial (4%)
Length = 250
Score = 52.0 bits (26), Expect = 6e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 701 ttgaaaaagggaagcaagatgatgca 726
||||||||||||||||||||||||||
Sbjct: 37 ttgaaaaagggaagcaagatgatgca 12