Miyakogusa Predicted Gene
- Lj0g3v0146809.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0146809.1 Non Chatacterized Hit- tr|I1KWC9|I1KWC9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,33.48,1e-18,U1-like
zinc finger,Zinc finger, U1-type; zinc finger,Zinc finger, C2H2-like;
zf-met,NULL; ZINC FING,CUFF.8957.1
(1170 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73905 similar to UniRef100_A7PDG1 Cluster: Chromosome... 1146 0.0
gnl|LJGI|TC75653 similar to UniRef100_A7PDG1 Cluster: Chromosome... 1088 0.0
gnl|LJGI|BW623829 similar to UniRef100_A7PDG1 Cluster: Chromosom... 825 0.0
>gnl|LJGI|TC73905 similar to UniRef100_A7PDG1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 708
Score = 1146 bits (578), Expect = 0.0
Identities = 600/610 (98%)
Strand = Plus / Plus
Query: 5 acccacagcaacagcaacatcaccttgttcccgtcaccaatttgcagcaaccgtactatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 acccacagcaacagcaacatcaccttgttcccgtcaccaatttgcagcaaccgtactatt 158
Query: 65 ctgcaaacccatatttgataccttaccctcacacctcagattctgcaattcatcctcctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctgcaaacccatatttgataccttaccctcacacctcagattctgcaattcatcctcctg 218
Query: 125 gcaccgacccacctggaaattcaacttctttatctgttcctgatgcccaaacaacagatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gcaccgacccacctggaaattcaacttctttatctgttcctgatgcccaaacaacagatt 278
Query: 185 ctcagtactgggtcgtcgctgaacccatcagatatgatcttgcttctggttcatcacatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ctcagtactgggtcgtcgctgaacccatcagatatgatcttgcttctggttcatcacatg 338
Query: 245 tgactccagtggcgtctgcaagtttgccttatgcatggaatggcgcatggtcacatcaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgactccagtggcgtctgcaagtttgccttatgcatggaatggcgcatggtcacatcaag 398
Query: 305 ttttcactaatgatgccacggttgtgttgcctcataaaaccaaagtcaccaaagcaatgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ttttcactaatgatgccacggttgtgttgcctcataaaaccaaagtcaccaaagcaatgc 458
Query: 365 aatgtgaagtttgtaaaattgattgcaatactgcagatgtttatgaaaaacacatattgg 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gatgtgaagtttgtaaaattgattgcaatactgcagatgtttatgaaaaacacatattgg 518
Query: 425 gaaagaaacacnnnnnnnntttgcaggtatggaataatcccactactgcattattaccgg 484
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaaagaaacacaaaaaaaaattgcaggtatggaataatcccactactgcattattaccgg 578
Query: 485 gaccctctcatgcaaatgtgcaaagttcgacaagtggtatccaaggacaagttcaagttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 gaccctctcatgcaaatgtgcaaagttcgacaagtggtatccaaggacaagttcaagttg 638
Query: 545 gggctgaaggtgaggaattagaatctaagaaacggaaggatttgagtggtggaacaccca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gggctgaaggtgaggaattagaatctaagaaacggaaggatttgagtggtggaacaccca 698
Query: 605 tggactccgt 614
||||||||||
Sbjct: 699 tggactccgt 708
>gnl|LJGI|TC75653 similar to UniRef100_A7PDG1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 743
Score = 1088 bits (549), Expect = 0.0
Identities = 549/549 (100%)
Strand = Plus / Plus
Query: 622 tgcacggtgtgcaacgttatgtgcaacagtgaagacacgtatagcaagcatctagctggg 681
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgcacggtgtgcaacgttatgtgcaacagtgaagacacgtatagcaagcatctagctggg 60
Query: 682 aaaaggcatacggctcaggttggcttgatgaataataatgggattggtccttctgttgct 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaggcatacggctcaggttggcttgatgaataataatgggattggtccttctgttgct 120
Query: 742 gcattcaagcgtcgaaaagctccaaagaaaatacaggttgctcaatcagcatggtgtgaa 801
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcattcaagcgtcgaaaagctccaaagaaaatacaggttgctcaatcagcatggtgtgaa 180
Query: 802 gtttgtaagattacttgtgacaccaaggatatgtatattatccacttatctgggaagaaa 861
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttgtaagattacttgtgacaccaaggatatgtatattatccacttatctgggaagaaa 240
Query: 862 cacctgaaaaacttggagaaactgtcaaaaccagaaactggtgtcggtgccagtgccgca 921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacctgaaaaacttggagaaactgtcaaaaccagaaactggtgtcggtgccagtgccgca 300
Query: 922 cctgcaaatccaataatcgggccactggaaaagccaggttctgataaaccaagaaaggca 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctgcaaatccaataatcgggccactggaaaagccaggttctgataaaccaagaaaggca 360
Query: 982 ccagaaatggatattgagacaaagaaacgtaaaattgttgaaggaggggctgcagaagct 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccagaaatggatattgagacaaagaaacgtaaaattgttgaaggaggggctgcagaagct 420
Query: 1042 gctgttagattgtgcgatctatgcaacgtggtgtgcaacagcgagaaagttttcaatact 1101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctgttagattgtgcgatctatgcaacgtggtgtgcaacagcgagaaagttttcaatact 480
Query: 1102 caccttgttggacataaacacgctgctatggtgaagaagaagcaggcagagtcaagcact 1161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caccttgttggacataaacacgctgctatggtgaagaagaagcaggcagagtcaagcact 540
Query: 1162 agctgatgt 1170
|||||||||
Sbjct: 541 agctgatgt 549
>gnl|LJGI|BW623829 similar to UniRef100_A7PDG1 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 503
Score = 825 bits (416), Expect = 0.0
Identities = 419/420 (99%)
Strand = Plus / Plus
Query: 1 atgtacccacagcaacagcaacatcaccttgttcccgtcaccaatttgcagcaaccgtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgtacccacagcaacagcaacatcaccttgttcccgtcaccaatttgcagcaaccgtac 143
Query: 61 tattctgcaaacccatatttgataccttaccctcacacctcagattctgcaattcatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 tattctgcaaacccatatttgataccttaccctcacacctcagattctgcaattcatcct 203
Query: 121 cctggcaccgacccacctggaaattcaacttctttatctgttcctgatgcccaaacaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cctggcaccgacccacctggaaattcaacttctttatctgttcctgatgcccaaacaaca 263
Query: 181 gattctcagtactgggtcgtcgctgaacccatcagatatgatcttgcttctggttcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gattctcagtactgggtcgtcgctgaacccatcagatatgatcttgcttctggttcatca 323
Query: 241 catgtgactccagtggcgtctgcaagtttgccttatgcatggaatggcgcatggtcacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catgtgactccagtggcgtctgcaagtttgccttatgcatggaatggcgcatggtcacat 383
Query: 301 caagttttcactaatgatgccacggttgtgttgcctcataaaaccaaagtcaccaaagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caagttttcactaatgatgccacggttgtgttgcctcataaaaccaaagtcaccaaagca 443
Query: 361 atgcaatgtgaagtttgtaaaattgattgcaatactgcagatgtttatgaaaaacacata 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atgcgatgtgaagtttgtaaaattgattgcaatactgcagatgtttatgaaaaacacata 503