Miyakogusa Predicted Gene

Lj0g3v0146309.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0146309.1 Non Chatacterized Hit- tr|I1LTR4|I1LTR4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27433
PE,77.42,0.001,seg,NULL,CUFF.8921.1
         (244 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO028068 similar to UniRef100_Q8LJS2 Cluster: Histone d...    86   1e-16
gnl|LJGI|TC58416 similar to UniRef100_Q8LJS2 Cluster: Histone de...    86   1e-16
gnl|LJGI|AV781255 similar to UniRef100_A7PBY6 Cluster: Chromosom...    78   3e-14
gnl|LJGI|TC79611 similar to UniRef100_Q8LJS2 Cluster: Histone de...    70   7e-12

>gnl|LJGI|GO028068 similar to UniRef100_Q8LJS2 Cluster: Histone deacetylase HDT1; n=1;
           Glycine max|Rep: Histone deacetylase HDT1 - Glycine max
           (Soybean), partial (36%)
          Length = 786

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 61/67 (91%)
 Strand = Plus / Minus

                                                                       
Query: 66  acccaatgagtctgctttaaaaactccagtttatgctaagaaggccaaaaatgctactcc 125
           ||||||||| ||||||| |||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 437 acccaatgaatctgcttcaaaaactccagtttctggcaagaaagccaaaaatgctactcc 378

                  
Query: 126 agaaaag 132
           |||||||
Sbjct: 377 agaaaag 371


>gnl|LJGI|TC58416 similar to UniRef100_Q8LJS2 Cluster: Histone deacetylase HDT1; n=1;
           Glycine max|Rep: Histone deacetylase HDT1 - Glycine max
           (Soybean), partial (65%)
          Length = 1372

 Score = 85.7 bits (43), Expect = 1e-16
 Identities = 61/67 (91%)
 Strand = Plus / Plus

                                                                       
Query: 66  acccaatgagtctgctttaaaaactccagtttatgctaagaaggccaaaaatgctactcc 125
           ||||||||| ||||||| |||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 733 acccaatgaatctgcttcaaaaactccagtttctggcaagaaagccaaaaatgctactcc 792

                  
Query: 126 agaaaag 132
           |||||||
Sbjct: 793 agaaaag 799


>gnl|LJGI|AV781255 similar to UniRef100_A7PBY6 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 483

 Score = 77.8 bits (39), Expect = 3e-14
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                       
Query: 66  acccaatgagtctgctttaaaaactccagtttatgctaagaaggccaaaaatgctactcc 125
           ||||||||||| ||||| |||||||||||||| ||| |||||  |||||| |||||||||
Sbjct: 375 acccaatgagtatgcttcaaaaactccagtttctgccaagaaacccaaaagtgctactcc 316

                      
Query: 126 agaaaagactg 136
           ||| |||||||
Sbjct: 315 agagaagactg 305


>gnl|LJGI|TC79611 similar to UniRef100_Q8LJS2 Cluster: Histone deacetylase HDT1; n=1;
           Glycine max|Rep: Histone deacetylase HDT1 - Glycine max
           (Soybean), partial (11%)
          Length = 533

 Score = 69.9 bits (35), Expect = 7e-12
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                       
Query: 66  acccaatgagtctgctttaaaaactccagtttatgctaagaaggccaaaaatgctactcc 125
           ||||||||||| ||||| |||||||||||||| ||| |||||  |||||| |||||||||
Sbjct: 42  acccaatgagtatgcttcaaaaactccagtttctgccaagaa-accaaaagtgctactcc 100

                      
Query: 126 agaaaagactg 136
           ||| |||||||
Sbjct: 101 agagaagactg 111