Miyakogusa Predicted Gene
- Lj0g3v0146299.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0146299.1 Non Chatacterized Hit- tr|A5BVV5|A5BVV5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,58.9,2e-19,beta-sandwich domain of Sec23/24,NULL;
zf-Sec23_Sec24,Zinc finger, Sec23/Sec24-type; PROTEIN
TRANSPO,CUFF.8919.1
(247 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/... 490 e-138
gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome... 66 1e-10
gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosom... 52 2e-06
>gnl|LJGI|TC76285 similar to UniRef100_Q93ZN7 Cluster: At1g05520/T25N20_16; n=1;
Arabidopsis thaliana|Rep: At1g05520/T25N20_16 -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 533
Score = 490 bits (247), Expect = e-138
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 1 atgtcggagatggcgagcacggatcccgagggagtagacggagtacggatgacatggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atgtcggagatggcgagcacggatcccgagggagtagacggagtacggatgacatggaac 143
Query: 61 gtgtggcccagcagcaaagtcgaagcaagcaagtgcgtgatcccattagcggccaccgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gtgtggcccagcagcaaagtcgaagcaagcaagtgcgtgatcccattagcggccaccgtc 203
Query: 121 gccgtgatccgccctcaccccgacatccctcgcctcccgtactcccctctccgctgcaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gccgtgatccgccctcaccccgacatccctcgcctcccgtactcccctctccgctgcaaa 263
Query: 181 acctgcacctccgccctcaaccccttcgcccgcgtcgacttcaccgccaagatctggatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acctgcacctccgccctcaaccccttcgcccgcgtcgacttcaccgccaagatctggatc 323
Query: 241 tgcccct 247
|||||||
Sbjct: 324 tgcccct 330
>gnl|LJGI|TC62100 similar to UniRef100_A7QQS7 Cluster: Chromosome undetermined
scaffold_144, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_144,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (25%)
Length = 816
Score = 65.9 bits (33), Expect = 1e-10
Identities = 78/93 (83%)
Strand = Plus / Plus
Query: 155 tcccgtactcccctctccgctgcaaaacctgcacctccgccctcaaccccttcgcccgcg 214
|||| ||| |||| ||||||||||| | ||| ||||| ||| ||||||||| | ||
Sbjct: 332 tcccttacaccccactccgctgcaagtcatgctcctccctccttaaccccttctgcatcg 391
Query: 215 tcgacttcaccgccaagatctggatctgcccct 247
|||| ||||||||||||||||||||||||||||
Sbjct: 392 tcgatttcaccgccaagatctggatctgcccct 424
Score = 56.0 bits (28), Expect = 1e-07
Identities = 58/68 (85%)
Strand = Plus / Plus
Query: 37 gacggagtacggatgacatggaacgtgtggcccagcagcaaagtcgaagcaagcaagtgc 96
||||| ||||| ||||| |||||||| ||||| | |||||||||||||| ||||| |||
Sbjct: 205 gacggcgtacgcatgacctggaacgtctggccacggagcaaagtcgaagccagcaaatgc 264
Query: 97 gtgatccc 104
|| |||||
Sbjct: 265 gtaatccc 272
>gnl|LJGI|FS322399 similar to UniRef100_A7QJV5 Cluster: Chromosome undetermined
scaffold_108, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_108,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (29%)
Length = 812
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 214 gtcgacttcaccgccaagatctggatctgcccct 247
||||||||| |||||||||||||||||||||||
Sbjct: 352 gtcgacttcgtcgccaagatctggatctgcccct 385