Miyakogusa Predicted Gene

Lj0g3v0146069.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0146069.2 Non Chatacterized Hit- tr|K4BQG2|K4BQG2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,23.96,3e-18,A
Receptor for Ubiquitination Targets,F-box domain, cyclin-like;
seg,NULL; FBOX,F-box domain, cyclin,CUFF.8907.2
         (1406 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV779681 UniRef100_A9A3X6 Cluster: Dephospho-CoA kinase...   573   e-162

>gnl|LJGI|AV779681 UniRef100_A9A3X6 Cluster: Dephospho-CoA kinase, CoaE; n=1;
            Nitrosopumilus maritimus SCM1|Rep: Dephospho-CoA kinase,
            CoaE - Nitrosopumilus maritimus SCM1, partial (5%)
          Length = 504

 Score =  573 bits (289), Expect = e-162
 Identities = 301/305 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1102 aaatgcagttcagcatccttctctgcaaaggaacttggagttggaattagcaacagcata 1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504  aaatgcagttcagcatccttctctgcaaaggaacttggagttggaattagcaacagcata 445

                                                                        
Query: 1162 tatttctgcaatgatcaaactgctccttggtggaatgagtgggattctgatcatttcaaa 1221
            ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 444  tatttctgccatgatcgaactgctccttggtggaatgagtgggattctgatcatttccaa 385

                                                                        
Query: 1222 gggatatcacttcgtcttggcttaaataagactgatggaggtcattggggaaatttcaga 1281
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384  gggatatcacttcgtcttggcttaaataagactgatggaggtcattggggaaatttcaga 325

                                                                        
Query: 1282 ctttacaatatggatggtgagccgtttttctaccacggtgatatacacagttgggcatat 1341
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324  ctttaccatatggatggtgagccgtttttctaccacggtgatatacacagttgggcatat 265

                                                                        
Query: 1342 acctggcttactgcaccttcatggtggtgttacagaaatgttcctgtgatatcaactaga 1401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264  acctggcttactgcaccttcatggtggtgttacagaaatgttcctgtgatatcaactaga 205

                 
Query: 1402 taatc 1406
            |||||
Sbjct: 204  taatc 200