Miyakogusa Predicted Gene

Lj0g3v0145699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0145699.1 CUFF.8872.1
         (331 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO033068 similar to UniRef100_A3HR01 Cluster: Transcrip...   333   4e-91

>gnl|LJGI|GO033068 similar to UniRef100_A3HR01 Cluster: Transcriptional regulator,
           LysR family; n=1; Pseudomonas putida GB-1|Rep:
           Transcriptional regulator, LysR family - Pseudomonas
           putida (strain GB-1), partial (5%)
          Length = 816

 Score =  333 bits (168), Expect = 4e-91
 Identities = 280/316 (88%), Gaps = 6/316 (1%)
 Strand = Plus / Plus

                                                                       
Query: 22  ttctttggaaccgttttcccaaatcctctgaatattctcccaaaattctctcaaactccc 81
           ||||||| ||| | ||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 7   ttctttgaaacgggtttcccaaatcctctgaatattctctcaaaattttctcaaactccc 66

                                                                       
Query: 82  tcccaaaatt-tcccaaatttcccaatctcttctgatatttcatgggttcgttctaatat 140
           ||||| |||| ||||||||||||||||||||| |   |||||||||||||||||||||||
Sbjct: 67  tcccagaattctcccaaatttcccaatctcttatacaatttcatgggttcgttctaatat 126

                                                                       
Query: 141 ttgtgattcaagtttccaatctcctca-----tggcaaatctcttttttctatattctac 195
           ||| ||||||| ||||||||||||||      || |||||||||||| || |||||| ||
Sbjct: 127 ttgcgattcaactttccaatctcctctcctcctgacaaatctcttttctcaatattcaac 186

                                                                       
Query: 196 acaattcctaaatcatttgtcctgatatttgatgctctgtccaaccttactctctcacta 255
           | | |||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||
Sbjct: 187 aaagttcctaaatcatttgtcctgatgtttgatgctctgtccagcctcactctctcacta 246

                                                                       
Query: 256 gaagcaccgcgttttcatctaaggattcaaaacgactatggttccaggtttgtgattgaa 315
           ||||||| ||| |||||||||||||||||||  |    ||||||||||||||||||||||
Sbjct: 247 gaagcactgcggtttcatctaaggattcaaactgtacgtggttccaggtttgtgattgaa 306

                           
Query: 316 tcttctctcacatagg 331
           ||||||||||||||||
Sbjct: 307 tcttctctcacatagg 322